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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small nucleolar ribonucleoprotein complex 1.263E-3 5 72 2 6292
small-subunit processome 4.7604E-3 5 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

maturation of SSU-rRNA 8.4895E-4 5 59 2 6292
protein amino acid demethylation 1.5888E-3 5 2 1 6292
histone demethylation 1.5888E-3 5 2 1 6292
demethylation 1.5888E-3 5 2 1 6292
protein amino acid dealkylation 1.5888E-3 5 2 1 6292
UDP-glucose metabolic process 2.3825E-3 5 3 1 6292
rRNA processing 3.9447E-3 5 128 2 6292
rRNA metabolic process 4.5082E-3 5 137 2 6292
nucleotide-sugar metabolic process 5.552E-3 5 7 1 6292
chromatin organization 9.7131E-3 5 203 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

UTP:glucose-1-phosphate uridylyltransferase activity 7.9466E-4 5 1 1 6292
histone demethylase activity (H3-K4 specific) 7.9466E-4 5 1 1 6292
histone demethylase activity 1.5888E-3 5 2 1 6292
UTP-monosaccharide-1-phosphate uridylyltransferase activity 1.5888E-3 5 2 1 6292
demethylase activity 2.3825E-3 5 3 1 6292
uridylyltransferase activity 2.3825E-3 5 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle