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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proton-transporting ATP synthase, central stalk 2.3825E-3 5 3 1 6292
mitochondrial proton-transporting ATP synthase, central stalk 2.3825E-3 5 3 1 6292
proton-transporting ATP synthase complex, catalytic core F(1) 3.9682E-3 5 5 1 6292
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) 3.9682E-3 5 5 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

leucyl-tRNA aminoacylation 1.5888E-3 5 2 1 6292
lipid translocation 5.552E-3 5 7 1 6292
phospholipid translocation 5.552E-3 5 7 1 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 8.7135E-3 5 11 1 6292
deadenylation-dependent decapping of nuclear-transcribed mRNA 8.7135E-3 5 11 1 6292
cellular amino acid metabolic process 9.3452E-3 5 199 2 6292
phospholipid transport 9.5026E-3 5 12 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glutamate dehydrogenase activity 1.5888E-3 5 2 1 6292
leucine-tRNA ligase activity 1.5888E-3 5 2 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 3.1756E-3 5 4 1 6292
ion transmembrane transporter activity 5.1075E-3 5 146 2 6292
phospholipid-translocating ATPase activity 7.1338E-3 5 9 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors 9.5026E-3 5 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle