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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

fungal-type vacuole lumen 6.6592E-3 6 7 1 6292
vacuolar lumen 8.5551E-3 6 9 1 6292
fungal-type vacuole 8.7956E-3 6 158 2 6292
lytic vacuole 8.7956E-3 6 158 2 6292
storage vacuole 8.7956E-3 6 158 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular response to starvation 1.736E-4 6 22 2 6292
response to starvation 1.736E-4 6 22 2 6292
cellular response to external stimulus 4.4468E-4 6 35 2 6292
cellular response to extracellular stimulus 4.4468E-4 6 35 2 6292
cellular response to nutrient levels 4.4468E-4 6 35 2 6292
response to extracellular stimulus 5.2472E-4 6 38 2 6292
response to nutrient levels 5.2472E-4 6 38 2 6292
response to external stimulus 5.2472E-4 6 38 2 6292
cell communication 8.7368E-4 6 49 2 6292
glutaminyl-tRNA aminoacylation 9.5359E-4 6 1 1 6292
age-dependent response to reactive oxygen species 1.9064E-3 6 2 1 6292
age-dependent response to reactive oxygen species involved in chronological cell aging 1.9064E-3 6 2 1 6292
oxygen and reactive oxygen species metabolic process 3.8098E-3 6 4 1 6292
cellular response to phosphate starvation 4.7604E-3 6 5 1 6292
age-dependent response to oxidative stress 6.6592E-3 6 7 1 6292
age-dependent response to oxidative stress involved in chronological cell aging 6.6592E-3 6 7 1 6292
age-dependent general metabolic decline involved in chronological cell aging 6.6592E-3 6 7 1 6292
age-dependent general metabolic decline 7.6075E-3 6 8 1 6292
regulation of proteolysis 7.6075E-3 6 8 1 6292
response to stress 8.1759E-3 6 497 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glutamine-tRNA ligase activity 9.5359E-4 6 1 1 6292
superoxide dismutase activity 1.9064E-3 6 2 1 6292
oxidoreductase activity, acting on superoxide radicals as acceptor 1.9064E-3 6 2 1 6292
endopeptidase regulator activity 2.8585E-3 6 3 1 6292
endopeptidase inhibitor activity 2.8585E-3 6 3 1 6292
peptidase regulator activity 3.8098E-3 6 4 1 6292
serine-type endopeptidase activity 3.8098E-3 6 4 1 6292
peptidase inhibitor activity 3.8098E-3 6 4 1 6292
serine-type peptidase activity 5.7102E-3 6 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle