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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

polysome 9.041E-5 6 16 2 6292
chitosome 1.9064E-3 6 2 1 6292
membrane raft 7.6075E-3 6 8 1 6292
ribonucleoprotein complex 8.9879E-3 6 514 3 6292
spore wall 9.5019E-3 6 10 1 6292
ascospore wall 9.5019E-3 6 10 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translational frameshifting 4.5436E-6 6 4 2 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 4.1526E-5 6 11 2 6292
nuclear-transcribed mRNA catabolic process 5.2472E-4 6 38 2 6292
mRNA metabolic process 7.0938E-4 6 213 3 6292
regulation of translation 1.1817E-3 6 57 2 6292
posttranscriptional regulation of gene expression 1.3526E-3 6 61 2 6292
regulation of cellular protein metabolic process 1.6787E-3 6 68 2 6292
mRNA catabolic process 1.7281E-3 6 69 2 6292
regulation of protein metabolic process 1.9854E-3 6 74 2 6292
RNA catabolic process 2.3169E-3 6 80 2 6292
sexual sporulation 4.4957E-3 6 112 2 6292
sexual sporulation resulting in formation of a cellular spore 4.4957E-3 6 112 2 6292
cell development 4.4957E-3 6 112 2 6292
ascospore formation 4.4957E-3 6 112 2 6292
sporulation 5.5741E-3 6 125 2 6292
sporulation resulting in formation of a cellular spore 5.5741E-3 6 125 2 6292
anatomical structure formation involved in morphogenesis 5.9278E-3 6 129 2 6292
reproductive process in single-celled organism 6.3845E-3 6 134 2 6292
lysine biosynthetic process via aminoadipic acid 7.6075E-3 6 8 1 6292
cell differentiation 7.7472E-3 6 148 2 6292
reproductive developmental process 8.0552E-3 6 151 2 6292
nitrogen compound metabolic process 8.5237E-3 6 1791 5 6292
lysine metabolic process 8.5551E-3 6 9 1 6292
cell wall chitin biosynthetic process 8.5551E-3 6 9 1 6292
lysine biosynthetic process 8.5551E-3 6 9 1 6292
cell wall polysaccharide biosynthetic process 8.5551E-3 6 9 1 6292
cell wall chitin metabolic process 9.5019E-3 6 10 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chitin synthase activity 2.8585E-3 6 3 1 6292
acetylglucosaminyltransferase activity 5.7102E-3 6 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle