| From Publication: | Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44 |
| Notes: | MIPS hand-curated complex set. MIPS complex ID: 510.30 |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase I upstream activating factor complex | 9.6394E-11 | 3 | 4 | 3 | 6292 |
| RNA polymerase I transcription factor complex | 2.0243E-9 | 3 | 9 | 3 | 6292 |
| nucleolar part | 3.4196E-7 | 3 | 45 | 3 | 6292 |
| transcription factor complex | 1.3774E-6 | 3 | 71 | 3 | 6292 |
| nucleolus | 3.7195E-5 | 3 | 211 | 3 | 6292 |
| nucleoplasm part | 5.8345E-5 | 3 | 245 | 3 | 6292 |
| nucleoplasm | 7.3064E-5 | 3 | 264 | 3 | 6292 |
| nuclear lumen | 3.709E-4 | 3 | 453 | 3 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| intracellular non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription from RNA polymerase I promoter | 9.784E-8 | 3 | 30 | 3 | 6292 |
| transcription, DNA-dependent | 5.081E-4 | 3 | 503 | 3 | 6292 |
| RNA biosynthetic process | 5.2344E-4 | 3 | 508 | 3 | 6292 |
| transcription | 6.7188E-4 | 3 | 552 | 3 | 6292 |
| RNA metabolic process | 3.4763E-3 | 3 | 954 | 3 | 6292 |
| cellular macromolecule biosynthetic process | 6.7003E-3 | 3 | 1187 | 3 | 6292 |
| macromolecule biosynthetic process | 6.7343E-3 | 3 | 1189 | 3 | 6292 |
| gene expression | 8.4626E-3 | 3 | 1283 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rDNA binding | 8.4345E-10 | 3 | 7 | 3 | 6292 |
| RNA polymerase I transcription factor activity | 2.8918E-9 | 3 | 10 | 3 | 6292 |
| sequence-specific DNA binding | 4.7233E-7 | 3 | 50 | 3 | 6292 |
| DNA binding | 6.6597E-5 | 3 | 256 | 3 | 6292 |
| transcription regulator activity | 1.5509E-4 | 3 | 339 | 3 | 6292 |
| nucleic acid binding | 1.1811E-3 | 3 | 666 | 3 | 6292 |
| binding | 8.6823E-3 | 3 | 1294 | 3 | 6292 |