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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

methionyl glutamyl tRNA synthetase complex 9.6394E-11 3 4 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

tRNA aminoacylation 1.3148E-7 3 33 3 6292
amino acid activation 1.3148E-7 3 33 3 6292
tRNA aminoacylation for protein translation 1.3148E-7 3 33 3 6292
tRNA metabolic process 6.7679E-6 3 120 3 6292
cellular amino acid metabolic process 3.1176E-5 3 199 3 6292
cellular amine metabolic process 4.3352E-5 3 222 3 6292
amine metabolic process 5.6922E-5 3 243 3 6292
cellular amino acid and derivative metabolic process 5.6922E-5 3 243 3 6292
ncRNA metabolic process 6.7384E-5 3 257 3 6292
organic acid metabolic process 1.4698E-4 3 333 3 6292
oxoacid metabolic process 1.4698E-4 3 333 3 6292
carboxylic acid metabolic process 1.4698E-4 3 333 3 6292
cellular ketone metabolic process 1.6493E-4 3 346 3 6292
translation 2.118E-4 3 376 3 6292
glutamyl-tRNA aminoacylation 1.4299E-3 3 3 1 6292
small molecule metabolic process 1.7562E-3 3 760 3 6292
methionyl-tRNA aminoacylation 1.9063E-3 3 4 1 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
cellular protein metabolic process 4.9618E-3 3 1074 3 6292
protein metabolic process 5.8726E-3 3 1136 3 6292
cellular macromolecule biosynthetic process 6.7003E-3 3 1187 3 6292
macromolecule biosynthetic process 6.7343E-3 3 1189 3 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ligase activity, forming aminoacyl-tRNA and related compounds 1.0615E-4 3 38 2 6292
aminoacyl-tRNA ligase activity 1.0615E-4 3 38 2 6292
ligase activity, forming carbon-oxygen bonds 1.0615E-4 3 38 2 6292
methionine-tRNA ligase activity 9.5344E-4 3 2 1 6292
glutamate-tRNA ligase activity 1.4299E-3 3 3 1 6292
ligase activity 1.6673E-3 3 150 2 6292
tRNA binding 2.3825E-3 3 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle