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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin organization 1.036E-3 2 203 2 6292
regulation of transposition, DNA-mediated 2.5415E-3 2 8 1 6292
negative regulation of transposition, DNA-mediated 2.5415E-3 2 8 1 6292
transposition, DNA-mediated 2.5415E-3 2 8 1 6292
negative regulation of transposition 2.859E-3 2 9 1 6292
regulation of transposition 2.859E-3 2 9 1 6292
negative regulation of DNA recombination 3.811E-3 2 12 1 6292
regulation of DNA recombination 4.7627E-3 2 15 1 6292
nucleosome assembly 5.0798E-3 2 16 1 6292
chromatin assembly 6.0308E-3 2 19 1 6292
negative regulation of DNA metabolic process 6.6645E-3 2 21 1 6292
chromosome organization 7.7677E-3 2 555 2 6292
DNA metabolic process 8.631E-3 2 585 2 6292
nucleosome organization 9.1975E-3 2 29 1 6292
regulation of DNA metabolic process 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone binding 4.4455E-3 2 14 1 6292
histone acetyltransferase activity 5.3968E-3 2 17 1 6292
lysine N-acetyltransferase activity 5.3968E-3 2 17 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle