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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase complex 7.3127E-17 5 6 5 6292
mannosyltransferase complex 7.3127E-17 5 6 5 6292
Golgi cis cisterna 3.0713E-15 5 10 5 6292
Golgi stack 5.3237E-14 5 16 5 6292
Golgi cisterna 5.3237E-14 5 16 5 6292
organelle subcompartment 5.3237E-14 5 16 5 6292
Golgi apparatus part 2.226E-9 5 119 5 6292
Golgi apparatus 1.3999E-8 5 171 5 6292
protein complex 1.913E-4 5 1137 5 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycoprotein biosynthetic process 3.1227E-10 5 81 5 6292
glycoprotein metabolic process 3.5387E-10 5 83 5 6292
protein amino acid glycosylation 9.2307E-8 5 75 4 6292
glycosylation 9.2307E-8 5 75 4 6292
macromolecule glycosylation 9.2307E-8 5 75 4 6292
cellular carbohydrate metabolic process 1.2067E-7 5 262 5 6292
carbohydrate metabolic process 1.7169E-7 5 281 5 6292
substituted mannan metabolic process 5.0527E-7 5 2 2 6292
mannan metabolic process 5.0527E-7 5 2 2 6292
hemicellulose metabolic process 5.0527E-7 5 2 2 6292
barrier septum formation 1.5153E-6 5 3 2 6292
protein amino acid N-linked glycosylation 4.3914E-6 5 49 3 6292
cell wall polysaccharide metabolic process 3.3242E-5 5 12 2 6292
mannoprotein biosynthetic process 3.9273E-5 5 13 2 6292
mannoprotein metabolic process 3.9273E-5 5 13 2 6292
cell wall glycoprotein biosynthetic process 3.9273E-5 5 13 2 6292
cell wall mannoprotein biosynthetic process 3.9273E-5 5 13 2 6292
cell wall macromolecule biosynthetic process 1.1598E-4 5 22 2 6292
cellular component macromolecule biosynthetic process 1.1598E-4 5 22 2 6292
cellular cell wall macromolecule metabolic process 1.2698E-4 5 23 2 6292
cell wall macromolecule metabolic process 1.3848E-4 5 24 2 6292
protein modification process 1.8329E-4 5 499 4 6292
cellular macromolecule biosynthetic process 2.3732E-4 5 1187 5 6292
macromolecule biosynthetic process 2.3933E-4 5 1189 5 6292
macromolecule modification 3.0739E-4 5 569 4 6292
cellular polysaccharide metabolic process 7.3776E-4 5 55 2 6292
polysaccharide metabolic process 8.7794E-4 5 60 2 6292
cellular biosynthetic process 9.5349E-4 5 1567 5 6292
biosynthetic process 1.065E-3 5 1602 5 6292
cell wall biogenesis 1.5574E-3 5 80 2 6292
cytokinetic process 2.0552E-3 5 92 2 6292
cytokinesis 3.0323E-3 5 112 2 6292
N-glycan processing 3.1756E-3 5 4 1 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cell division 5.0392E-3 5 145 2 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase activity 1.1493E-12 5 6 4 6292
mannosyltransferase activity 1.1732E-11 5 43 5 6292
transferase activity, transferring hexosyl groups 2.93E-10 5 80 5 6292
transferase activity, transferring glycosyl groups 1.1208E-9 5 104 5 6292
transferase activity 3.2254E-5 5 797 5 6292
catalytic activity 4.6443E-3 5 2150 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle