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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

TRAMP complex 1.2712E-3 2 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

snRNA metabolic process 1.819E-6 2 9 2 6292
snoRNA metabolic process 7.7306E-6 2 18 2 6292
tRNA metabolic process 3.6076E-4 2 120 2 6292
snRNA processing 9.5344E-4 2 3 1 6292
ncRNA processing 1.1624E-3 2 215 2 6292
tRNA catabolic process 1.2712E-3 2 4 1 6292
snRNA catabolic process 1.5888E-3 2 5 1 6292
snoRNA catabolic process 1.5888E-3 2 5 1 6292
ncRNA metabolic process 1.6621E-3 2 257 2 6292
ncRNA polyadenylation 1.9064E-3 2 6 1 6292
ncRNA catabolic process 1.9064E-3 2 6 1 6292
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process 1.9064E-3 2 6 1 6292
rRNA catabolic process 1.9064E-3 2 6 1 6292
snoRNA processing 2.224E-3 2 7 1 6292
polyadenylation-dependent RNA catabolic process 2.5415E-3 2 8 1 6292
polyadenylation-dependent ncRNA catabolic process 2.5415E-3 2 8 1 6292
RNA processing 3.6384E-3 2 380 2 6292
ncRNA 3'-end processing 3.811E-3 2 12 1 6292
termination of RNA polymerase II transcription 6.0308E-3 2 19 1 6292
transcription termination 6.6645E-3 2 21 1 6292
RNA polyadenylation 8.248E-3 2 26 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA polymerase II transcription termination factor activity 3.1786E-4 2 1 1 6292
transcription termination factor activity 6.3568E-4 2 2 1 6292
polynucleotide adenylyltransferase activity 1.9064E-3 2 6 1 6292
5'-3' DNA helicase activity 2.5415E-3 2 8 1 6292
adenylyltransferase activity 4.1283E-3 2 13 1 6292
RNA-dependent ATPase activity 9.1975E-3 2 29 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle