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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

NatA complex 1.4299E-3 3 3 1 6292
N-terminal protein acetyltransferase complex 4.2857E-3 3 9 1 6292
protein acetyltransferase complex 4.2857E-3 3 9 1 6292
90S preribosome 8.0849E-3 3 17 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.1809E-5 3 13 2 6292
maturation of SSU-rRNA 2.5779E-4 3 59 2 6292
rRNA processing 1.2156E-3 3 128 2 6292
rRNA metabolic process 1.3919E-3 3 137 2 6292
ncRNA processing 3.4084E-3 3 215 2 6292
N-terminal protein amino acid acetylation 4.7611E-3 3 10 1 6292
ncRNA metabolic process 4.8516E-3 3 257 2 6292
peptide or protein amino-terminal blocking 7.136E-3 3 15 1 6292
N-terminal protein amino acid modification 7.136E-3 3 15 1 6292
ribosome biogenesis 8.7172E-3 3 346 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptide alpha-N-acetyltransferase activity 4.7611E-3 3 10 1 6292
peptide N-acetyltransferase activity 4.7611E-3 3 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle