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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 2.1103E-6 7 101 4 6292
cytosolic part 4.503E-6 7 122 4 6292
ribosomal subunit 2.2637E-5 7 183 4 6292
cytosolic large ribosomal subunit 2.8086E-5 7 60 3 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
cytosol 1.277E-4 7 284 4 6292
ribosome 1.3857E-4 7 290 4 6292
large ribosomal subunit 1.7293E-4 7 110 3 6292
ribonucleoprotein complex 1.2617E-3 7 514 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.411E-5 7 376 5 6292
processing of 27S pre-rRNA 1.2639E-4 7 16 2 6292
regulation of translation 1.6447E-3 7 57 2 6292
obsolete_biological_process 1.8211E-3 7 60 2 6292
posttranscriptional regulation of gene expression 1.8819E-3 7 61 2 6292
cellular protein metabolic process 2.2261E-3 7 1074 5 6292
regulation of cellular protein metabolic process 2.3339E-3 7 68 2 6292
regulation of protein metabolic process 2.7584E-3 7 74 2 6292
protein metabolic process 2.8929E-3 7 1136 5 6292
cellular macromolecule biosynthetic process 3.5479E-3 7 1187 5 6292
macromolecule biosynthetic process 3.5757E-3 7 1189 5 6292
ribosome biogenesis 4.8878E-3 7 346 3 6292
gene expression 5.0816E-3 7 1283 5 6292
ribonucleoprotein complex biogenesis 6.0923E-3 7 374 3 6292
ribosomal large subunit export from nucleus 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA binding 4.6941E-7 7 16 3 6292
structural constituent of ribosome 8.2387E-7 7 212 5 6292
structural molecule activity 8.4682E-6 7 339 5 6292
RNA binding 3.4624E-4 7 367 4 6292
7S RNA binding 1.1125E-3 7 1 1 6292
5S rRNA binding 2.224E-3 7 2 1 6292
nucleic acid binding 3.3506E-3 7 666 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle