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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pore complex 2.1179E-6 4 52 3 6292
nuclear pore 2.1179E-6 4 52 3 6292
nuclear envelope 1.2179E-4 4 199 3 6292
integral to membrane 2.5535E-4 4 255 3 6292
intrinsic to membrane 2.7682E-4 4 262 3 6292
endomembrane system 9.5789E-4 4 398 3 6292
envelope 1.9337E-3 4 505 3 6292
organelle envelope 1.9337E-3 4 505 3 6292
membrane part 4.2752E-3 4 662 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear transport 1.741E-7 4 130 4 6292
nucleocytoplasmic transport 1.741E-7 4 130 4 6292
protein localization in nucleus 1.6583E-6 4 48 3 6292
protein import into nucleus 1.6583E-6 4 48 3 6292
nuclear import 1.6583E-6 4 48 3 6292
protein import 1.9433E-5 4 108 3 6292
protein localization in organelle 5.1173E-5 4 149 3 6292
intracellular transport 5.908E-5 4 553 4 6292
establishment of localization in cell 8.1397E-5 4 599 4 6292
cellular localization 1.0815E-4 4 643 4 6292
nuclear pore organization 1.1396E-4 4 28 2 6292
protein targeting 2.0015E-4 4 235 3 6292
intracellular protein transport 2.5535E-4 4 255 3 6292
cellular macromolecular complex subunit organization 2.6748E-4 4 259 3 6292
protein transport 2.9943E-4 4 269 3 6292
establishment of protein localization 3.0611E-4 4 271 3 6292
cellular protein localization 3.1631E-4 4 274 3 6292
cellular macromolecule localization 3.5193E-4 4 284 3 6292
protein localization 4.2667E-4 4 303 3 6292
cellular protein complex assembly 4.2906E-4 4 54 2 6292
nucleus organization 4.6154E-4 4 56 2 6292
transport 6.2722E-4 4 997 4 6292
pore complex assembly 6.3573E-4 4 1 1 6292
nuclear pore complex assembly 6.3573E-4 4 1 1 6292
establishment of localization 6.5541E-4 4 1008 4 6292
macromolecular complex subunit organization 6.9425E-4 4 357 3 6292
localization 8.0172E-4 4 1060 4 6292
macromolecule localization 9.5079E-4 4 397 3 6292
protein import into nucleus, docking 2.5411E-3 4 4 1 6292
protein complex biogenesis 3.5019E-3 4 155 2 6292
protein complex assembly 3.5019E-3 4 155 2 6292
cellular macromolecular complex assembly 4.8049E-3 4 182 2 6292
cellular component biogenesis 4.9063E-3 4 694 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transmembrane transporter activity 1.0898E-5 4 9 2 6292
macromolecule transmembrane transporter activity 1.0898E-5 4 9 2 6292
protein transporter activity 4.952E-4 4 58 2 6292
structural constituent of nuclear pore 2.5411E-3 4 4 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle