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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pore complex 1.9993E-4 3 52 2 6292
nuclear pore 1.9993E-4 3 52 2 6292
nuclear envelope 2.9239E-3 3 199 2 6292
integral to membrane 4.7773E-3 3 255 2 6292
intrinsic to membrane 5.0399E-3 3 262 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pore complex assembly 4.768E-4 3 1 1 6292
nuclear pore complex assembly 4.768E-4 3 1 1 6292
protein desumoylation 9.5344E-4 3 2 1 6292
nuclear transport 1.2538E-3 3 130 2 6292
nucleocytoplasmic transport 1.2538E-3 3 130 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transmembrane transporter activity 5.4528E-6 3 9 2 6292
macromolecule transmembrane transporter activity 5.4528E-6 3 9 2 6292
protein transporter activity 2.4908E-4 3 58 2 6292
SUMO-specific protease activity 9.5344E-4 3 2 1 6292
substrate-specific transmembrane transporter activity 5.2316E-3 3 267 2 6292
transmembrane transporter activity 6.8456E-3 3 306 2 6292
substrate-specific transporter activity 8.2289E-3 3 336 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle