| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 3 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| HTA2 |
|
|
|
| KAP114 |
|
|
|
| NAP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear nucleosome | 9.9937E-6 | 3 | 12 | 2 | 6292 |
| nucleosome | 9.9937E-6 | 3 | 12 | 2 | 6292 |
| protein-DNA complex | 2.4051E-4 | 3 | 57 | 2 | 6292 |
| nuclear chromatin | 3.9536E-4 | 3 | 73 | 2 | 6292 |
| chromatin | 4.4E-4 | 3 | 77 | 2 | 6292 |
| nuclear chromosome part | 2.6674E-3 | 3 | 190 | 2 | 6292 |
| nuclear chromosome | 3.8286E-3 | 3 | 228 | 2 | 6292 |
| chromosomal part | 4.1335E-3 | 3 | 237 | 2 | 6292 |
| chromosome | 5.5058E-3 | 3 | 274 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| chromatin assembly or disassembly | 8.9875E-5 | 3 | 35 | 2 | 6292 |
| chromatin organization | 3.0416E-3 | 3 | 203 | 2 | 6292 |
| nucleosome assembly | 7.6106E-3 | 3 | 16 | 1 | 6292 |
| chromatin assembly | 9.0332E-3 | 3 | 19 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein transmembrane transporter activity | 4.2857E-3 | 3 | 9 | 1 | 6292 |
| macromolecule transmembrane transporter activity | 4.2857E-3 | 3 | 9 | 1 | 6292 |
| histone binding | 6.6614E-3 | 3 | 14 | 1 | 6292 |
| binding | 8.6823E-3 | 3 | 1294 | 3 | 6292 |