From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mRNA cleavage factor complex | 7.4262E-11 | 4 | 20 | 4 | 6292 |
nucleoplasm part | 2.2451E-6 | 4 | 245 | 4 | 6292 |
nucleoplasm | 3.0322E-6 | 4 | 264 | 4 | 6292 |
nuclear lumen | 2.6539E-5 | 4 | 453 | 4 | 6292 |
organelle lumen | 1.2008E-4 | 4 | 660 | 4 | 6292 |
intracellular organelle lumen | 1.2008E-4 | 4 | 660 | 4 | 6292 |
membrane-enclosed lumen | 1.5203E-4 | 4 | 700 | 4 | 6292 |
nuclear part | 9.4015E-4 | 4 | 1103 | 4 | 6292 |
protein complex | 1.0617E-3 | 4 | 1137 | 4 | 6292 |
macromolecular complex | 4.5471E-3 | 4 | 1635 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mRNA polyadenylation | 5.9409E-11 | 4 | 19 | 4 | 6292 |
mRNA cleavage | 1.9389E-10 | 4 | 25 | 4 | 6292 |
RNA polyadenylation | 2.2915E-10 | 4 | 26 | 4 | 6292 |
mRNA 3'-end processing | 4.8228E-10 | 4 | 31 | 4 | 6292 |
RNA 3'-end processing | 1.7156E-9 | 4 | 42 | 4 | 6292 |
nucleic acid phosphodiester bond hydrolysis | 2.5012E-9 | 4 | 46 | 4 | 6292 |
mRNA processing | 3.6385E-7 | 4 | 156 | 4 | 6292 |
mRNA metabolic process | 1.2778E-6 | 4 | 213 | 4 | 6292 |
RNA processing | 1.3107E-5 | 4 | 380 | 4 | 6292 |
RNA metabolic process | 5.2568E-4 | 4 | 954 | 4 | 6292 |
gene expression | 1.7224E-3 | 4 | 1283 | 4 | 6292 |
nucleic acid metabolic process | 2.5494E-3 | 4 | 1415 | 4 | 6292 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 3.8261E-3 | 4 | 1566 | 4 | 6292 |
cellular nitrogen compound metabolic process | 6.2471E-3 | 4 | 1770 | 4 | 6292 |
nitrogen compound metabolic process | 6.5492E-3 | 4 | 1791 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
protein heterodimerization activity | 1.8182E-6 | 4 | 4 | 2 | 6292 |
protein dimerization activity | 4.5436E-6 | 4 | 6 | 2 | 6292 |
RNA binding | 7.5347E-4 | 4 | 367 | 3 | 6292 |
binding | 1.7823E-3 | 4 | 1294 | 4 | 6292 |
protein binding | 3.3984E-3 | 4 | 612 | 3 | 6292 |
nucleic acid binding | 4.351E-3 | 4 | 666 | 3 | 6292 |