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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 6.6564E-11 5 60 5 6292
cytosolic ribosome 9.6539E-10 5 101 5 6292
large ribosomal subunit 1.4917E-9 5 110 5 6292
cytosolic part 2.5264E-9 5 122 5 6292
ribosomal subunit 1.9728E-8 5 183 5 6292
cytosol 1.8112E-7 5 284 5 6292
ribosome 2.0123E-7 5 290 5 6292
ribonucleoprotein complex 3.5735E-6 5 514 5 6292
intracellular non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 7.4317E-7 5 376 5 6292
cellular protein metabolic process 1.4379E-4 5 1074 5 6292
protein metabolic process 1.9046E-4 5 1136 5 6292
cellular macromolecule biosynthetic process 2.3732E-4 5 1187 5 6292
macromolecule biosynthetic process 2.3933E-4 5 1189 5 6292
gene expression 3.5034E-4 5 1283 5 6292
ribosomal large subunit assembly 4.092E-4 5 41 2 6292
ribosomal subunit assembly 7.3776E-4 5 55 2 6292
cellular biosynthetic process 9.5349E-4 5 1567 5 6292
ribosome assembly 9.9868E-4 5 64 2 6292
ribosomal large subunit biogenesis 1.0301E-3 5 65 2 6292
biosynthetic process 1.065E-3 5 1602 5 6292
organelle assembly 1.1603E-3 5 69 2 6292
ribonucleoprotein complex assembly 2.0552E-3 5 92 2 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292
cellular macromolecular complex assembly 7.856E-3 5 182 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.1476E-8 5 212 5 6292
structural molecule activity 4.4145E-7 5 339 5 6292
RNA binding 1.8021E-3 5 367 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle