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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 12 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar large ribosomal subunit 2.933E-23 12 50 11 6292
mitochondrial large ribosomal subunit 2.933E-23 12 50 11 6292
organellar ribosome 3.2476E-20 12 90 11 6292
mitochondrial ribosome 3.2476E-20 12 90 11 6292
large ribosomal subunit 3.3182E-19 12 110 11 6292
mitochondrial matrix 7.0446E-17 12 176 11 6292
mitochondrial lumen 7.0446E-17 12 176 11 6292
ribosomal subunit 1.0943E-16 12 183 11 6292
ribosome 1.911E-14 12 290 11 6292
mitochondrial part 4.5585E-12 12 475 11 6292
ribonucleoprotein complex 1.0889E-11 12 514 11 6292
organelle lumen 1.7049E-10 12 660 11 6292
intracellular organelle lumen 1.7049E-10 12 660 11 6292
membrane-enclosed lumen 3.2513E-10 12 700 11 6292
mitochondrion 1.0171E-9 12 1125 12 6292
non-membrane-bounded organelle 1.0154E-8 12 959 11 6292
intracellular non-membrane-bounded organelle 1.0154E-8 12 959 11 6292
macromolecular complex 3.2574E-6 12 1635 11 6292
cytoplasmic part 1.3968E-5 12 2482 12 6292
organelle part 1.1283E-4 12 2282 11 6292
intracellular organelle part 1.1283E-4 12 2282 11 6292
cytoplasm 1.0392E-3 12 3552 12 6292
membrane-bounded organelle 2.1329E-3 12 3771 12 6292
intracellular membrane-bounded organelle 2.1329E-3 12 3771 12 6292
intracellular organelle 5.3355E-3 12 4070 12 6292
organelle 5.3513E-3 12 4071 12 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 3.4314E-13 12 376 11 6292
cellular protein metabolic process 3.482E-8 12 1074 11 6292
protein metabolic process 6.4045E-8 12 1136 11 6292
cellular macromolecule biosynthetic process 1.0311E-7 12 1187 11 6292
macromolecule biosynthetic process 1.0501E-7 12 1189 11 6292
gene expression 2.393E-7 12 1283 11 6292
cellular biosynthetic process 2.065E-6 12 1567 11 6292
biosynthetic process 2.6176E-6 12 1602 11 6292
mitochondrial genome maintenance 3.0686E-5 12 34 3 6292
cellular macromolecule metabolic process 1.144E-4 12 2285 11 6292
macromolecule metabolic process 1.5296E-4 12 2349 11 6292
primary metabolic process 1.3504E-3 12 2896 11 6292
cellular metabolic process 2.1697E-3 12 3033 11 6292
mitochondrion organization 2.7899E-3 12 156 3 6292
metabolic process 3.2647E-3 12 3157 11 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 5.7344E-16 12 212 11 6292
structural molecule activity 1.0864E-13 12 339 11 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle