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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic small ribosomal subunit 5.6325E-9 5 38 4 6292
small ribosomal subunit 8.2682E-8 5 73 4 6292
90S preribosome 1.6332E-7 5 17 3 6292
cytosolic ribosome 3.0904E-7 5 101 4 6292
cytosolic part 6.6303E-7 5 122 4 6292
preribosome 1.4314E-6 5 34 3 6292
ribosomal subunit 3.3861E-6 5 183 4 6292
cytosol 1.9613E-5 5 284 4 6292
ribosome 2.1316E-5 5 290 4 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
intracellular non-membrane-bounded organelle 2.3579E-3 5 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 6.8758E-8 5 13 3 6292
regulation of translation 6.9607E-6 5 57 3 6292
maturation of SSU-rRNA 7.7299E-6 5 59 3 6292
posttranscriptional regulation of gene expression 8.5535E-6 5 61 3 6292
regulation of cellular protein metabolic process 1.1891E-5 5 68 3 6292
regulation of protein metabolic process 1.5358E-5 5 74 3 6292
translation 5.9837E-5 5 376 4 6292
rRNA processing 7.9834E-5 5 128 3 6292
rRNA metabolic process 9.7825E-5 5 137 3 6292
ncRNA processing 3.7398E-4 5 215 3 6292
ncRNA metabolic process 6.3367E-4 5 257 3 6292
ribosome biogenesis 1.5173E-3 5 346 3 6292
ribonucleoprotein complex biogenesis 1.9042E-3 5 374 3 6292
RNA processing 1.9946E-3 5 380 3 6292
regulation of gene expression 3.1553E-3 5 445 3 6292
regulation of macromolecule biosynthetic process 3.3863E-3 5 456 3 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
regulation of cellular biosynthetic process 3.7412E-3 5 472 3 6292
regulation of biosynthetic process 3.7641E-3 5 473 3 6292
regulation of macromolecule metabolic process 4.1189E-3 5 488 3 6292
protein metabolic process 4.528E-3 5 1136 4 6292
regulation of primary metabolic process 4.783E-3 5 514 3 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
regulation of cellular metabolic process 5.3949E-3 5 536 3 6292
poly(A)+ mRNA export from nucleus 5.552E-3 5 7 1 6292
regulation of metabolic process 5.7186E-3 5 547 3 6292
biological regulation 5.8209E-3 5 1213 4 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
gene expression 7.2106E-3 5 1283 4 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 6.1033E-6 5 212 4 6292
structural molecule activity 3.9664E-5 5 339 4 6292
telomeric DNA binding 9.5026E-3 5 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle