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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small nucleolar ribonucleoprotein complex 7.6343E-4 4 72 2 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translational fidelity 1.0898E-5 4 9 2 6292
regulation of translational elongation 2.3591E-5 4 13 2 6292
translational elongation 1.2238E-4 4 29 2 6292
regulation of translation 4.7822E-4 4 57 2 6292
posttranscriptional regulation of gene expression 5.4787E-4 4 61 2 6292
regulation of cellular protein metabolic process 6.8098E-4 4 68 2 6292
regulation of protein metabolic process 8.0639E-4 4 74 2 6292
translation 8.0953E-4 4 376 3 6292
gene expression 1.7224E-3 4 1283 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.4716E-4 4 212 3 6292
structural molecule activity 5.9551E-4 4 339 3 6292
rRNA (adenine-N6,N6-)-dimethyltransferase activity 6.3573E-4 4 1 1 6292
rRNA (adenine) methyltransferase activity 6.3573E-4 4 1 1 6292
rRNA methyltransferase activity 3.1756E-3 4 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle