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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein kinase CK2 complex 3.8553E-10 4 4 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of transcription from RNA polymerase I promoter 3.8553E-10 4 4 3 6292
regulation of transcription from RNA polymerase III promoter 3.3722E-9 4 7 3 6292
flocculation via cell wall protein-carbohydrate interaction 1.1558E-8 4 10 3 6292
flocculation 1.589E-8 4 11 3 6292
G2/M transition of mitotic cell cycle 3.5113E-7 4 29 3 6292
transcription from RNA polymerase I promoter 3.901E-7 4 30 3 6292
transcription from RNA polymerase III promoter 8.0979E-7 4 38 3 6292
G1/S transition of mitotic cell cycle 1.8787E-6 4 50 3 6292
interphase of mitotic cell cycle 1.4053E-5 4 97 3 6292
interphase 1.4053E-5 4 97 3 6292
protein amino acid phosphorylation 1.6844E-5 4 103 3 6292
cellular chemical homeostasis 2.603E-5 4 119 3 6292
cellular ion homeostasis 2.603E-5 4 119 3 6292
cellular homeostasis 2.6694E-5 4 120 3 6292
chemical homeostasis 2.8754E-5 4 123 3 6292
ion homeostasis 2.8754E-5 4 123 3 6292
response to stress 3.8497E-5 4 497 4 6292
multi-organism process 4.5231E-5 4 143 3 6292
phosphorylation 8.8702E-5 4 179 3 6292
phosphorus metabolic process 1.8528E-4 4 229 3 6292
phosphate metabolic process 1.8528E-4 4 229 3 6292
response to DNA damage stimulus 2.027E-4 4 236 3 6292
response to stimulus 2.1816E-4 4 766 4 6292
mitotic cell cycle 2.5535E-4 4 255 3 6292
cellular response to stress 3.7451E-4 4 290 3 6292
post-translational protein modification 6.9425E-4 4 357 3 6292
regulation of transcription, DNA-dependent 7.0003E-4 4 358 3 6292
regulation of RNA metabolic process 7.294E-4 4 363 3 6292
cell cycle phase 8.0953E-4 4 376 3 6292
cellular response to stimulus 8.288E-4 4 379 3 6292
regulation of transcription 8.6159E-4 4 384 3 6292
homeostatic process 1.0308E-3 4 408 3 6292
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 1.084E-3 4 415 3 6292
regulation of nitrogen compound metabolic process 1.0917E-3 4 416 3 6292
regulation of gene expression 1.3321E-3 4 445 3 6292
regulation of macromolecule biosynthetic process 1.4316E-3 4 456 3 6292
regulation of cellular biosynthetic process 1.5848E-3 4 472 3 6292
regulation of biosynthetic process 1.5947E-3 4 473 3 6292
regulation of macromolecule metabolic process 1.7483E-3 4 488 3 6292
cell cycle process 1.7695E-3 4 490 3 6292
protein modification process 1.8668E-3 4 499 3 6292
transcription, DNA-dependent 1.9112E-3 4 503 3 6292
RNA biosynthetic process 1.9676E-3 4 508 3 6292
regulation of primary metabolic process 2.0368E-3 4 514 3 6292
cell cycle 2.1676E-3 4 525 3 6292
regulation of cellular metabolic process 2.3038E-3 4 536 3 6292
regulation of metabolic process 2.4454E-3 4 547 3 6292
regulation of biological quality 2.4982E-3 4 551 3 6292
transcription 2.5116E-3 4 552 3 6292
macromolecule modification 2.7453E-3 4 569 3 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 3.8261E-3 4 1566 4 6292
cellular biosynthetic process 3.8359E-3 4 1567 4 6292
biosynthetic process 4.1907E-3 4 1602 4 6292
coenzyme A biosynthetic process 4.4437E-3 4 7 1 6292
coenzyme A metabolic process 4.4437E-3 4 7 1 6292
nucleoside bisphosphate metabolic process 4.4437E-3 4 7 1 6292
cellular nitrogen compound metabolic process 6.2471E-3 4 1770 4 6292
nitrogen compound metabolic process 6.5492E-3 4 1791 4 6292
regulation of cellular process 7.309E-3 4 796 3 6292
regulation of biological process 8.0789E-3 4 824 3 6292
response to salt stress 8.8726E-3 4 14 1 6292
purine ribonucleoside metabolic process 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein kinase CK2 activity 3.0316E-7 4 2 2 6292
obsolete_molecular_function 5.0107E-6 4 69 3 6292
protein kinase CK2 regulator activity 1.2712E-3 4 2 1 6292
phosphopantothenoylcysteine decarboxylase activity 1.9063E-3 4 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle