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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear lumen 1.2511E-4 5 453 4 6292
nucleolus 3.5374E-4 5 211 3 6292
organelle lumen 5.503E-4 5 660 4 6292
intracellular organelle lumen 5.503E-4 5 660 4 6292
membrane-enclosed lumen 6.9283E-4 5 700 4 6292
nuclear part 4.0435E-3 5 1103 4 6292
preribosome, large subunit precursor 7.1338E-3 5 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 4.8924E-7 5 346 5 6292
establishment of ribosome localization 6.2313E-7 5 26 3 6292
ribosome localization 6.2313E-7 5 26 3 6292
ribosomal subunit export from nucleus 6.2313E-7 5 26 3 6292
ribonucleoprotein complex biogenesis 7.2351E-7 5 374 5 6292
establishment of organelle localization 6.2441E-6 5 55 3 6292
ribosomal large subunit biogenesis 1.0371E-5 5 65 3 6292
cellular component biogenesis 1.6117E-5 5 694 5 6292
organelle localization 2.3339E-5 5 85 3 6292
nuclear export 4.1609E-5 5 103 3 6292
nuclear transport 8.3625E-5 5 130 3 6292
nucleocytoplasmic transport 8.3625E-5 5 130 3 6292
cell proliferation 3.9682E-3 5 5 1 6292
intracellular transport 5.9002E-3 5 553 3 6292
ribosomal large subunit export from nucleus 7.1338E-3 5 9 1 6292
establishment of localization in cell 7.4143E-3 5 599 3 6292
cellular localization 9.0715E-3 5 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 9.0741E-4 5 61 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle