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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA-directed RNA polymerase II, core complex 9.9937E-6 3 12 2 6292
RNA polymerase complex 7.0268E-5 3 31 2 6292
nuclear DNA-directed RNA polymerase complex 7.0268E-5 3 31 2 6292
DNA-directed RNA polymerase complex 7.0268E-5 3 31 2 6292
DNA-directed RNA polymerase II, holoenzyme 2.321E-4 3 56 2 6292
nucleoplasm part 4.414E-3 3 245 2 6292
nucleoplasm 5.1161E-3 3 264 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

response to ethanol 9.5344E-4 3 2 1 6292
transcription from RNA polymerase II promoter 8.1809E-3 3 335 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA polymerase activity 8.4748E-5 3 34 2 6292
DNA-directed RNA polymerase activity 8.4748E-5 3 34 2 6292
nucleotidyltransferase activity 2.089E-3 3 168 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle