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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

90S preribosome 1.5788E-12 7 17 5 6292
preribosome 7.0672E-11 7 34 5 6292
cytosolic ribosome 1.0185E-10 7 101 6 6292
cytosolic small ribosomal subunit 1.2735E-10 7 38 5 6292
cytosolic part 3.2391E-10 7 122 6 6292
small ribosomal subunit 3.7754E-9 7 73 5 6292
ribosomal subunit 3.8154E-9 7 183 6 6292
ribonucleoprotein complex 2.338E-8 7 514 7 6292
cytosol 5.413E-8 7 284 6 6292
ribosome 6.138E-8 7 290 6 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
macromolecular complex 7.9244E-5 7 1635 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.5814E-9 7 376 7 6292
cellular protein metabolic process 4.1538E-6 7 1074 7 6292
protein metabolic process 6.1593E-6 7 1136 7 6292
cellular macromolecule biosynthetic process 8.3828E-6 7 1187 7 6292
macromolecule biosynthetic process 8.4824E-6 7 1189 7 6292
gene expression 1.4468E-5 7 1283 7 6292
cellular biosynthetic process 5.8828E-5 7 1567 7 6292
biosynthetic process 6.8686E-5 7 1602 7 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8.2282E-5 7 13 2 6292
cellular macromolecule metabolic process 8.282E-4 7 2285 7 6292
macromolecule metabolic process 1.0051E-3 7 2349 7 6292
regulation of translation 1.6447E-3 7 57 2 6292
maturation of SSU-rRNA 1.7614E-3 7 59 2 6292
posttranscriptional regulation of gene expression 1.8819E-3 7 61 2 6292
regulation of cellular protein metabolic process 2.3339E-3 7 68 2 6292
regulation of protein metabolic process 2.7584E-3 7 74 2 6292
primary metabolic process 4.3588E-3 7 2896 7 6292
cellular metabolic process 6.026E-3 7 3033 7 6292
metabolic process 7.9792E-3 7 3157 7 6292
rRNA processing 8.0653E-3 7 128 2 6292
rRNA metabolic process 9.1999E-3 7 137 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.4752E-11 7 212 7 6292
structural molecule activity 1.2424E-9 7 339 7 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle