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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 10 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
RPL10
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • ribosomal large subunit assembly
  • translation
  • structural constituent of ribosome
  • RPL15A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL2A, RPL2B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • regulation of translation
  • response to drug
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPL4B
  • cytoplasm
  • translation
  • structural constituent of ribosome
  • RPL5
  • ribosomal large subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPP0
  • ribosomal large subunit assembly
  • translational elongation
  • translation
  • structural constituent of ribosome
  • RPS11A, RPS11B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • 90S preribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPS1A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • 90S preribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS1B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • 90S preribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS3
  • preribosome, small subunit precursor
  • response to DNA damage stimulus
  • translation
  • structural constituent of ribosome
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    cytosolic ribosome 2.9383E-9 10 101 6 6292
    cytosolic part 9.2635E-9 10 122 6 6292
    ribosomal subunit 1.0638E-7 10 183 6 6292
    preribosome 1.4589E-7 10 34 4 6292
    cytosol 1.4464E-6 10 284 6 6292
    ribosome 1.6359E-6 10 290 6 6292
    90S preribosome 1.9436E-6 10 17 3 6292
    ribonucleoprotein complex 2.253E-6 10 514 7 6292
    cytosolic small ribosomal subunit 2.3692E-5 10 38 3 6292
    cytosolic large ribosomal subunit 9.4349E-5 10 60 3 6292
    small ribosomal subunit 1.6962E-4 10 73 3 6292
    large ribosomal subunit 5.7057E-4 10 110 3 6292
    non-membrane-bounded organelle 1.4928E-3 10 959 6 6292
    intracellular non-membrane-bounded organelle 1.4928E-3 10 959 6 6292
    macromolecular complex 4.416E-3 10 1635 7 6292
    preribosome, small subunit precursor 9.5019E-3 10 6 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 5.1842E-13 10 376 10 6292
    cellular protein metabolic process 2.0277E-8 10 1074 10 6292
    protein metabolic process 3.5625E-8 10 1136 10 6292
    cellular macromolecule biosynthetic process 5.5363E-8 10 1187 10 6292
    macromolecule biosynthetic process 5.6306E-8 10 1189 10 6292
    gene expression 1.2084E-7 10 1283 10 6292
    cellular biosynthetic process 8.9828E-7 10 1567 10 6292
    ribosomal subunit assembly 1.0557E-6 10 55 4 6292
    biosynthetic process 1.121E-6 10 1602 10 6292
    ribosome assembly 1.9533E-6 10 64 4 6292
    organelle assembly 2.6475E-6 10 69 4 6292
    ribonucleoprotein complex assembly 8.4067E-6 10 92 4 6292
    ribosomal large subunit assembly 2.9863E-5 10 41 3 6292
    cellular macromolecule metabolic process 3.9402E-5 10 2285 10 6292
    macromolecule metabolic process 5.1966E-5 10 2349 10 6292
    ribosomal large subunit biogenesis 1.1993E-4 10 65 3 6292
    cellular macromolecular complex assembly 1.2411E-4 10 182 4 6292
    primary metabolic process 4.2311E-4 10 2896 10 6292
    cellular macromolecular complex subunit organization 4.8407E-4 10 259 4 6292
    macromolecular complex assembly 6.6045E-4 10 281 4 6292
    cellular metabolic process 6.7219E-4 10 3033 10 6292
    metabolic process 1.0041E-3 10 3157 10 6292
    ribosome biogenesis 1.4482E-3 10 346 4 6292
    macromolecular complex subunit organization 1.628E-3 10 357 4 6292
    ribonucleoprotein complex biogenesis 1.9363E-3 10 374 4 6292
    cellular component assembly 2.1564E-3 10 385 4 6292
    regulation of translation 3.4634E-3 10 57 2 6292
    posttranscriptional regulation of gene expression 3.9577E-3 10 61 2 6292
    regulation of cellular protein metabolic process 4.8974E-3 10 68 2 6292
    regulation of protein metabolic process 5.7773E-3 10 74 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 1.531E-15 10 212 10 6292
    structural molecule activity 1.8156E-13 10 339 10 6292
    rRNA binding 2.6962E-4 10 16 2 6292
    RNA binding 1.8047E-3 10 367 4 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle