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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 4.4059E-5 4 514 4 6292
nuclear outer membrane 1.0884E-3 4 86 2 6292
box H/ACA snoRNP complex 1.2712E-3 4 2 1 6292
nuclear membrane 1.3833E-3 4 97 2 6292
macromolecular complex 4.5471E-3 4 1635 4 6292
outer membrane 4.5994E-3 4 178 2 6292
organelle outer membrane 4.5994E-3 4 178 2 6292
nuclear envelope 5.7261E-3 4 199 2 6292
nuclear membrane-endoplasmic reticulum network 7.7328E-3 4 232 2 6292
cytoplasmic mRNA processing body 9.5041E-3 4 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA pseudouridine synthesis 2.5411E-3 4 4 1 6292
traversing start control point of mitotic cell cycle 3.8098E-3 4 6 1 6292
response to exogenous dsRNA 4.4437E-3 4 7 1 6292
response to dsRNA 4.4437E-3 4 7 1 6292
pseudouridine synthesis 5.7106E-3 4 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

5'-3' exoribonuclease activity 1.2712E-3 4 2 1 6292
recombinase activity 2.5411E-3 4 4 1 6292
pseudouridylate synthase activity 3.1756E-3 4 5 1 6292
5'-3' exonuclease activity 3.8098E-3 4 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle