YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

90S preribosome 8.0849E-3 3 17 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glutamine metabolic process 9.5344E-4 3 2 1 6292
'de novo' pyrimidine base biosynthetic process 6.1865E-3 3 13 1 6292
pyrimidine base biosynthetic process 7.6106E-3 3 16 1 6292
pyrimidine base metabolic process 8.5592E-3 3 18 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

aspartate carbamoyltransferase activity 4.768E-4 3 1 1 6292
carbamoyl-phosphate synthase activity 1.4299E-3 3 3 1 6292
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 1.4299E-3 3 3 1 6292
carboxyl- or carbamoyltransferase activity 1.4299E-3 3 3 1 6292
poly-purine tract binding 2.3825E-3 3 5 1 6292
poly(A) RNA binding 2.3825E-3 3 5 1 6292
single-stranded RNA binding 2.3825E-3 3 5 1 6292
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 4.2857E-3 3 9 1 6292
rRNA binding 7.6106E-3 3 16 1 6292
RNA binding 9.7865E-3 3 367 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle