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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar large ribosomal subunit 5.8813E-19 10 50 9 6292
mitochondrial large ribosomal subunit 5.8813E-19 10 50 9 6292
organellar ribosome 1.6483E-16 10 90 9 6292
mitochondrial ribosome 1.6483E-16 10 90 9 6292
large ribosomal subunit 1.0806E-15 10 110 9 6292
mitochondrial matrix 8.3596E-14 10 176 9 6292
mitochondrial lumen 8.3596E-14 10 176 9 6292
ribosomal subunit 1.1959E-13 10 183 9 6292
ribosome 7.9925E-12 10 290 9 6292
mitochondrial part 6.9265E-10 10 475 9 6292
ribonucleoprotein complex 1.4088E-9 10 514 9 6292
organelle lumen 1.3273E-8 10 660 9 6292
intracellular organelle lumen 1.3273E-8 10 660 9 6292
membrane-enclosed lumen 2.2469E-8 10 700 9 6292
mitochondrion 3.2309E-8 10 1125 10 6292
non-membrane-bounded organelle 3.7143E-7 10 959 9 6292
intracellular non-membrane-bounded organelle 3.7143E-7 10 959 9 6292
macromolecular complex 4.0767E-5 10 1635 9 6292
cytoplasmic part 9.0231E-5 10 2482 10 6292
organelle part 7.2492E-4 10 2282 9 6292
intracellular organelle part 7.2492E-4 10 2282 9 6292
cytoplasm 3.2692E-3 10 3552 10 6292
membrane-bounded organelle 5.9511E-3 10 3771 10 6292
intracellular membrane-bounded organelle 5.9511E-3 10 3771 10 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 8.4087E-11 10 376 9 6292
cellular protein metabolic process 1.0138E-6 10 1074 9 6292
protein metabolic process 1.6655E-6 10 1136 9 6292
cellular macromolecule biosynthetic process 2.4546E-6 10 1187 9 6292
macromolecule biosynthetic process 2.4913E-6 10 1189 9 6292
gene expression 4.872E-6 10 1283 9 6292
mitochondrial genome maintenance 1.6862E-5 10 34 3 6292
cellular biosynthetic process 2.8141E-5 10 1567 9 6292
biosynthetic process 3.4126E-5 10 1602 9 6292
cellular macromolecule metabolic process 7.3309E-4 10 2285 9 6292
macromolecule metabolic process 9.2762E-4 10 2349 9 6292
mitochondrion organization 1.5784E-3 10 156 3 6292
ribosomal large subunit assembly 1.8038E-3 10 41 2 6292
ribosomal subunit assembly 3.228E-3 10 55 2 6292
ribosome assembly 4.3489E-3 10 64 2 6292
ribosomal large subunit biogenesis 4.4831E-3 10 65 2 6292
organelle assembly 5.0393E-3 10 69 2 6292
primary metabolic process 5.4001E-3 10 2896 9 6292
cellular metabolic process 7.9165E-3 10 3033 9 6292
ribonucleoprotein complex assembly 8.8178E-3 10 92 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 4.6009E-13 10 212 9 6292
structural molecule activity 3.2934E-11 10 339 9 6292
peptidyltransferase activity 4.7611E-3 10 3 1 6292
transferase activity, transferring amino-acyl groups 7.9239E-3 10 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle