From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.487841310753] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
MCH5 |
|
|
|
VHT1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
vitamin transport | 2.2737E-6 | 2 | 10 | 2 | 6292 |
riboflavin transport | 3.1786E-4 | 2 | 1 | 1 | 6292 |
biotin transport | 3.1786E-4 | 2 | 1 | 1 | 6292 |
amide transport | 1.9064E-3 | 2 | 6 | 1 | 6292 |
monocarboxylic acid transport | 4.4455E-3 | 2 | 14 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
vitamin transporter activity | 1.0611E-6 | 2 | 7 | 2 | 6292 |
biotin transporter activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
riboflavin transporter activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
transmembrane transporter activity | 2.3578E-3 | 2 | 306 | 2 | 6292 |
transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |
cofactor transporter activity | 4.1283E-3 | 2 | 13 | 1 | 6292 |
monocarboxylic acid transmembrane transporter activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |