| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.527705570928] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA cap binding complex | 7.579E-7 | 2 | 6 | 2 | 6292 |
| nuclear cap binding complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| mRNA cap binding complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| commitment complex | 3.811E-3 | 2 | 12 | 1 | 6292 |
| U2-type spliceosomal complex | 3.811E-3 | 2 | 12 | 1 | 6292 |
| cytoplasmic mRNA processing body | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA metabolic process | 1.1408E-3 | 2 | 213 | 2 | 6292 |
| deadenylation-dependent decapping of nuclear-transcribed mRNA | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA cap binding | 5.0527E-8 | 2 | 2 | 2 | 6292 |
| RNA binding | 3.3934E-3 | 2 | 367 | 2 | 6292 |