From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.554370307995] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mating projection tip | 3.0063E-5 | 2 | 35 | 2 | 6292 |
cell projection part | 4.3504E-5 | 2 | 42 | 2 | 6292 |
cell projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
mating projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cyclin-dependent protein kinase inhibitor activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |
protein serine/threonine kinase inhibitor activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
Rho guanyl-nucleotide exchange factor activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
protein kinase inhibitor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
kinase inhibitor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
Ras guanyl-nucleotide exchange factor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |
cyclin-dependent protein kinase regulator activity | 8.248E-3 | 2 | 26 | 1 | 6292 |
enzyme inhibitor activity | 8.5646E-3 | 2 | 27 | 1 | 6292 |