From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.651674472115] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
DSE4 |
|
|
|
EGT2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
fungal-type cell wall | 2.7588E-4 | 2 | 105 | 2 | 6292 |
cell wall | 2.8118E-4 | 2 | 106 | 2 | 6292 |
external encapsulating structure | 2.8118E-4 | 2 | 106 | 2 | 6292 |
cell septum | 3.1786E-4 | 2 | 1 | 1 | 6292 |
extracellular region | 6.6645E-3 | 2 | 21 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytokinesis | 3.1407E-4 | 2 | 112 | 2 | 6292 |
cell division | 5.275E-4 | 2 | 145 | 2 | 6292 |
cytokinesis, completion of separation | 2.224E-3 | 2 | 7 | 1 | 6292 |
cytokinetic cell separation | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
hydrolase activity, hydrolyzing O-glycosyl compounds | 3.3651E-5 | 2 | 37 | 2 | 6292 |
hydrolase activity, acting on glycosyl bonds | 4.7798E-5 | 2 | 44 | 2 | 6292 |
cellulase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
glucan 1,3-beta-glucosidase activity | 2.5415E-3 | 2 | 8 | 1 | 6292 |
beta-glucosidase activity | 2.5415E-3 | 2 | 8 | 1 | 6292 |
glucosidase activity | 6.9813E-3 | 2 | 22 | 1 | 6292 |