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Protein Overview: gi|34862278, gi|...

General Information:
Name(s) found: gi|34862278 [NCBI NR]
gi|157823717 [NCBI NR]
gi|149034482 [NCBI NR]
gi|109481548 [NCBI NR]
Description(s) found:
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  • gi|34862278|ref|XP_343158.1| PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA associated [Rattus norvegicus] [NCBI NR]
  • gi|157823717|ref|NP_001102202.1| LSM7 homolog, U6 small nuclear RNA associated [Rattus norvegicus] [NCBI NR]
  • gi|149034482|gb|EDL89219.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (predicted), isoform CRA_d [Rattus norvegicus] [NCBI NR]
  • gi|109481548|ref|XP_001076086.1| PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA associated [Rattus norvegicus] [NCBI NR]
  • similar to RIKEN cDNA 0910001B06 [HMR_022704-rand.fasta]
  • similar to RIKEN cDNA 0910001B06 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA associated [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to RIKEN cDNA 0910001B06 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • LSM7 homolog, U6 small nuclear RNA associated [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (predicted), isoform CRA_d [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO RIKEN CDNA 0910001B06 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA associated [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Lsm7 LSM7 homolog, U6 small nuclear RNA associated [rat-ipi-250309-contam.fasta]
  • LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Predicted), isoform CRA_d OS=Rattus norvegicus GN=Lsm7 [011711_HMR.fasta]
  • LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Predicted), isoform CRA_d OS=Rattus norvegicus GN=Lsm7 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Predicted), isoform CRA_d OS=Rattus norvegicus GN=Lsm7 PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 103 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: protein binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKEKKKKE SILDLSKYID KTIRVKFQGG REASGILKGF DPLLNLVLDG TIEYMRDPDD  60
   61 QYKLTEDTRQ LGLVVCRGTS VVLICPQDGM EAIPNPFVQQ QDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle