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Protein Overview: gi|149023944, gi...

General Information:
Name(s) found: gi|34871191 [NCBI NR]
gi|187469116 [NCBI NR]
gi|157822899 [NCBI NR]
gi|149023945 [NCBI NR]
gi|149023944 [NCBI NR]
gi|149023943 [NCBI NR]
gi|109477217 [NCBI NR]
Description(s) found:
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  • gi|34871191|ref|XP_345582.1| PREDICTED: similar to U7 snRNP-specific Sm-like protein LSM10 [Rattus norvegicus] [NCBI NR]
  • gi|187469116|gb|AAI66902.1| Lsm10 protein [Rattus norvegicus] [NCBI NR]
  • gi|157822899|ref|NP_001102446.1| LSM10, U7 small nuclear RNA associated [Rattus norvegicus] [NCBI NR]
  • gi|149023945|gb|EDL80442.1| similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149023944|gb|EDL80441.1| similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149023943|gb|EDL80440.1| similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|109477217|ref|XP_001056695.1| PREDICTED: similar to U7 snRNP-specific Sm-like protein LSM10 [Rattus norvegicus] [NCBI NR]
  • similar to U7 snRNP-specific Sm-like protein LSM10 [HMR_022704-rand.fasta]
  • similar to U7 snRNP-specific Sm-like protein LSM10 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to U7 snRNP-specific Sm-like protein LSM10 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to U7 SnRNP-Specific Sm-like protein LSM10 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Lsm10 protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • U7 snRNP-specific Sm-like protein LSM10 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO U7 SNRNP-SPECIFIC SM-LIKE PROTEIN LSM10 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • LSM10, U7 small nuclear RNA associated [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • PREDICTED: similar to U7 snRNP-specific Sm-like protein LSM10 [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Lsm10 Lsm10 protein [rat-ipi-250309-contam.fasta]
  • Lsm10 protein OS=Rattus norvegicus GN=Lsm10 [011711_HMR.fasta]
  • Lsm10 protein OS=Rattus norvegicus GN=Lsm10 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 122 amino acids

    Gene Ontology:
    Cellular Component: Cajal body [UNKNOWN][IEA]
    U7 snRNP [UNKNOWN][IEA]
    Biological Process: S phase of mitotic cell cycle [UNKNOWN][IEA]
    Molecular Function: protein binding [UNKNOWN][IEA]
    histone pre-mRNA DCP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSHSVKER TISENSLIIL LQGLQGQITT VDLRDESVAR GRIDNVDAFM NIRLANVTYT  60
   61 DRWGHQVELD DLFVTGRNVR YVHIPDGVNI TATIEQQLQI IHRVRNFGGK GQGRREFPSK 120
  121 RP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle