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Protein Overview: Obp47a-PB

General Information:
Name(s) found: Obp47a-PB / FBpp0089400 [FlyBase]
Description(s) found:
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  • gi|45552575|ref|NP_995810.1| Odorant-binding protein 47a, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|45445581|gb|AAS64866.1| Odorant-binding protein 47a, isoform B [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 47a is referred to in FlyBase by the symbol Dmel\Obp47a (CG12944, FBgn0033573). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6797428..6797990. It has the cytological map location 47C6. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • (AAS64866) CG12944-PB [DrosMelano7227.FASTAC.txt]
  • CG12944-PB, isoform B [Drosophila melanogaster]gi|45552575|ref|NP_995810.1| CG12944-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(6797428..6797481,6797562..6797990); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866; MD5=97a9 [fly-100309-contam.fasta]
  • CG12944-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 47a CG12944-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(6797428..6797481,6797562..6797990); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(6797428..6797481,6797562..6797990); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 47a, isoform B OS=Drosophila melanogaster GN=Obp47a PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(6797428..6797481,6797562..6797990); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866,FlyMine:FBpp0089400,modMine:FBpp0089400; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(10909923..10909976,10910057..10910485); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866,FlyMine:FBpp0089400,modMine:FBpp0089400; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(10909923..10909976,10910057..10910485); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866,FlyMine:FBpp0089400,modMine:FBpp0089400; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A1Z8E3, Odorant-binding protein 47a, isoform B OS=Drosophila melanogaster GN=Obp47a PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0089400 type=protein; loc=2R:join(10909923..10909976,10910057..10910485); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866,FlyMine:FBpp0089400,modMine:FBpp0089400; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(10909923..10909976,10910057..10910485); ID=FBpp0089400; name=Obp47a-PB; parent=FBgn0033573,FBtr0088200; dbxref=FlyBase:FBpp0089400,FlyBase_Annotation_IDs:CG12944-PB,GB_protein:AAS64866.1,REFSEQ:NP_995810,GB_protein:AAS64866,UniProt/TrEMBL:A1Z8E4,FlyMine:FBpp0089400,modMine:FBpp0089400; MD5=97a945ead786b0021e9f69a595e8d019; length=160; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRVLVLLLV LKMFALSEIN INLGLTVADE SPKTITEEMI RLCGDQTDIS LRELNKLQRE  60
   61 DFSDPSESVQ CFTHCLYEQM GLMHDGVFVE RDLFGLLSDV SNTDYWPERQ CHAIRGNNKC 120
  121 ETAYRIHQCQ QQLKQQQQNL LATKEVEVTT TPAGSDETKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 23.09691 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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