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Protein Overview: CG7741-PA

General Information:
Name(s) found: CG7741-PA / FBpp0087219 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG7741 (CG7741, FBgn0033615). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:7189426..7193112. It has the cytological map location 47F1. It is reported to have molecular function</span>: RNA lariat debranching enzyme activity. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: RNA lariat debranching enzyme activity [NAS]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQVGSTNMM KIQSIAQLSI TMDAGTKILV VGDVRGRFKQ LFQRVEQVNK KAGPFEILCC  60
   61 VGDFFGEDKQ NEELIAYKNG FKHITVPTYI LGPNQREHEK YFENLTDGEI CTNLTYLGRR 120
  121 GVYTLSSGVK IAYLSGLEAQ GTADSAGSEH EFTKADVIAV RNSCLVSKNC STEYRGVDVL 180
  181 LTSQWPFGMQ EKENATASKL VSFLCREIKP RYHFCAINGT HYESAPFRMP KDETTQFELC 240
  241 TRFISLAEVG NAEKAKYIYA LSLKPVDKSR LLDLAQKTTN EIPCPFIGLD LGGAIGKNDS 300
  301 SENRQYFYDM DGGRRKRQGG DNNKRDKRPR IPQIEQDKCW FCLSSPDVEK HLIITVGEHF 360
  361 YLALAKGPIN KHHVMILSTK HVPCAAQLSP DDWKELNKFK AALRKFFKTL GQVVCFTERH 420
  421 YKSVHLQINA LAFEEGYAWK IKHSFEDKAE EFNLEFETLP ALDSEKMLPE MGPYFLAELP 480
  481 DDSTLITRQM KHFPIHFARD VFCSENLLNC DEKVNWKDCL LDKDEEVAYV EDFRKAFAPF 540
  541 DFTDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 4.0 PP5 structure
    2 View Details [126..452] PSI-BLAST 14.69897 Galactose-1-phosphate uridylyltransferase
    3 View Details [453..545] Pfam 23.886057 No description for PF04676.5 was found. Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  1.24536295645879 bayes_pls_golite062009
  • binding
    		•  1.12315862086587 bayes_pls_golite062009
  • catalytic activity
    		•  0.096119422680995 bayes_pls_golite062009
  • protein binding
    		•  0.0847290693390839 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle