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Protein Overview: Obp50e-PA

General Information:
Name(s) found: Obp50e-PA / FBpp0086684 [FlyBase]
Description(s) found:
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  • gi|45550427|ref|NP_610959.2| Odorant-binding protein 50e [Drosophila melanogaster] [NCBI NR]
  • gi|45445555|gb|AAF58251.2| Odorant-binding protein 50e [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 50e is referred to in FlyBase by the symbol Dmel\Obp50e (CG13939, FBgn0033931). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10262077..10262836. It has the cytological map location 50F6. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • (AAF58251) CG13939-PA [DrosMelano7227.FASTAC.txt]
  • CG13939-PA [Drosophila melanogaster]gi|45550427|ref|NP_610959.2| CG13939-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(10262077..10262291,10262349..10262505,10262565..10262684,10262738..10262836); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-P [fly-100309-contam.fasta]
  • Odorant-binding protein 50e CG13939-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13939-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(10262077..10262291,10262349..10262505,10262565..10262684,10262738..10262836); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(10262077..10262291,10262349..10262505,10262565..10262684,10262738..10262836); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 50e OS=Drosophila melanogaster GN=Obp50e PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(10262077..10262291,10262349..10262505,10262565..10262684,10262738..10262836); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251,FlyMine:FBpp0086684,modMine:FBpp0086684; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(14375233..14375331,14375060..14375179,14374844..14375000,14374572..14374786)); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251,FlyMine:FBpp0086684,modMine:FBpp0086684; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(14375233..14375331,14375060..14375179,14374844..14375000,14374572..14374786)); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251,FlyMine:FBpp0086684,modMine:FBpp0086684; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0086684 type=protein; loc=2R:complement(join(14375233..14375331,14375060..14375179,14374844..14375000,14374572..14374786)); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251,FlyMine:FBpp0086684,modMine:FBpp0086684; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(14375233..14375331,14375060..14375179,14374844..14375000,14374572..14374786)); ID=FBpp0086684; name=Obp50e-PA; parent=FBgn0033931,FBtr0087556; dbxref=GB_protein:AAF58251.1,FlyBase:FBpp0086684,FlyBase_Annotation_IDs:CG13939-PA,GB_protein:AAF58251.2,REFSEQ:NP_610959,GB_protein:AAF58251,UniProt/TrEMBL:A1Z9Q6,FlyMine:FBpp0086684,modMine:FBpp0086684; MD5=33751f2688319b98c7467df7ff53fc66; length=196; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sensory perception of chemical stimulus [UNKNOWN]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKYIICFGF LLIILECSLA SFNCSAPPNF NNFDINTCCR TPELDMGDVP QKCHKYVSGL  60
   61 KSANSKYPSY AHLCYPDCIY RETGAMVNGK IKVNRVKQYL EEHVHRRDQE IVSHIVQSFE 120
  121 SCLSNVKGHM KSLNIESYKV LPHGCSPFAG IIYSCVNAET FLNCPQQMWK NEKPCNLAKQ 180
  181 FAEQCNPLPH VPLPSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] FFAS03 1.72 Crystal structure of a pheromone binding protein from the cockroach Leucophaea maderae in complex with the fluorescent reporter ANS (1-anilinonaphtalene-8-sulfonic acid),

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • odorant binding
    		•  4.30384487978807 bayes_pls_golite062009
  • pheromone binding
    		•  2.39768039305435 bayes_pls_golite062009
  • binding
    		•  1.28042629944593 bayes_pls_golite062009
  • phenylalkylamine binding
    		•  0.936465350042035 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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