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Protein Overview: CheB42c-PA

General Information:
Name(s) found: CheB42c-PA / FBpp0085518 [FlyBase]
Description(s) found:
Found 11 descriptions.
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  • The gene Chemosensory protein B 42c is referred to in FlyBase by the symbol Dmel\CheB42c (CG33350, FBgn0066292). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2832119..2832912. It has the cytological map location 42E1. There is experimental evidence that it has the molecular function</span>: pheromone binding. There is experimental evidence that it is involved in the biological process</span>: detection of pheromone. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [ISS]
    membrane [IEA]
    Biological Process: sodium ion transport [IEA]
    detection of pheromone [IEP]
    Molecular Function: sodium channel activity [IEA]
    pheromone binding [IEP]
    lipid binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFVFGFASS WAADYELLLE DPDIFSPCTE PPPGSIGFHD AFDIGDLVVD QDMDIIHLSE  60
   61 SVTSIWDVEP TDRISARFAI MHYNRGSWEP TVFSMATPDF CASMFDENQS WFKYWTKHIS 120
  121 NRDEVMEKCF KTRGTVIMHN PFDLQLRLTD IRGATLRGRY KAVVTFEAVD EKDVPRRNSI 180
  181 CFEIRGEAEK IN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] FFAS03 1.51 GM2-activator Protein crystal structure

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.150611973436827 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle