YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: stops-PA

General Information:
Name(s) found: stops-PA / FBpp0085143 [FlyBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • The gene slow termination of phototransduction is referred to in FlyBase by the symbol Dmel\stops (CG31006, FBgn0086704). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:26983878..26994825. It has the cytological map location 100B4-100B5. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: deactivation of rhodopsin mediated signaling. 13 alleles are reported. The phenotype of these alleles is annotated with: eye photoreceptor cell. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 521 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular signaling pathway [IEA]
    deactivation of rhodopsin mediated signaling [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSQLLQAFQ RLVSQLKSQF VWVRCWLPFP RHFYGFRRET ESRARLRLRV REQLRRNPAN  60
   61 RASHQRNRRT QRRHLVMDYI FECFFDDTFE QISRNGLQDR QSRRDVLDHL SSIIKGCSGG 120
  121 QNSQTDEVAA IAVTAAMRYH RMAKEQNGQV CLMGKYHNIL YIGLRTCWDW GVRDSEVVVK 180
  181 LLVAIYECEK TYERIFLGAL FGPHAPHFIA GWRSDFQDQH ENVRAMVYFL KHATREQLTL 240
  241 PVWIPRFEQE RQLRFIDVPI ESCGKSSPLR IALQANAPEL LLILLRYGAA PQPPDGGASV 300
  301 IIALLDKLIE DGRNYSFELV MCLKILLRNV VMIEMPFKPL LYAARREMFF DRYGRLLMDK 360
  361 IIGKEQVYGV PSLRHLCRCC IRDVMRMHNQ LPSGIDTLRL PKRLQRYIDL TEELEGPEAQ 420
  421 DTEDKDQQRG KSSAKCKMGS EMGRLDTISS AGESEDESEN QAQLLQAVTD PEKAALAAFM 480
  481 ATGDGAYTEE AKKAAVEAYV AACPPDFDPD FPPISLPGEP R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] deduced N/A No confident structure predictions are available.
    2 View Details [202..360] PSI-BLAST 3.69897 No description for 2bkgA was found.
    3 View Details [361..414] MSA 5.088997 View MSA. No confident structure predictions are available.
    4 View Details [415..521] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle