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Protein Overview: CG6276-PA

General Information:
Name(s) found: CG6276-PA / FBpp0082577 [FlyBase]
Description(s) found:
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  • gi|45550753|ref|NP_650445.3| CG6276 [Drosophila melanogaster] [NCBI NR]
  • gi|45446501|gb|AAF55167.2| CG6276 [Drosophila melanogaster] [NCBI NR]
  • gi|17862356|gb|AAL39655.1| LD22971p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6276 (CG6276, FBgn0038316). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11143924..11145768. It has the cytological map location 88F1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: DNA binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • (AAF55167) CG6276-PA [DrosMelano7227.FASTAC.txt]
  • CG6276-PA [Drosophila melanogaster]gi|17862356|gb|AAL39655.1| LD22971p [Drosophila melanogaster]gi|45550753|ref|NP_650445.3| CG6276-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(11144162..11145487,11145549..11145635); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_65044 [fly-100309-contam.fasta]
  • CG6276-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD22971p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(11144162..11145487,11145549..11145635); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(11144162..11145487,11145549..11145635); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG6276 OS=Drosophila melanogaster GN=CG6276 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(11144162..11145487,11145549..11145635); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167,FlyMine:FBpp0082577,modMine:FBpp0082577; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG6276 OS=Drosophila melanogaster GN=CG6276 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(15319827..15319913,15318440..15319765)); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167,FlyMine:FBpp0082577,modMine:FBpp0082577; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(15319827..15319913,15318440..15319765)); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167,FlyMine:FBpp0082577,modMine:FBpp0082577; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0082577 type=protein; loc=3R:complement(join(15319827..15319913,15318440..15319765)); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167,FlyMine:FBpp0082577,modMine:FBpp0082577; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(15319827..15319913,15318440..15319765)); ID=FBpp0082577; name=CG6276-PA; parent=FBgn0038316,FBtr0083123; dbxref=GB_protein:AAF55167.1,FlyBase:FBpp0082577,FlyBase_Annotation_IDs:CG6276-PA,GB_protein:AAF55167.2,REFSEQ:NP_650445,GB_protein:AAF55167,UniProt/TrEMBL:Q9VF93,FlyMine:FBpp0082577,modMine:FBpp0082577; MD5=e3d8b17d27f92e2303e2d0acb1a90c78; length=470; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 470 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTTDFAGSQ FVSSNPNTSC SASRWLTEEV FKLIEIVQRD EAIYNPRHKY YFCRPYVENF  60
   61 WREVDLKLEK NPGASLAKWT NLRISFRREY TNYLEEKVPP CWSYFDRMFF LHPYLRKKHQ 120
  121 QPKSLDTQVQ DALAHLSNLS SRMQRERSVT IPGSSSIGGQ PTPSAHQSPP AQQLDNYLDY 180
  181 FDEAEHNNSE LDDIMEEEQQ RNSRYHGQLD GNDIKSECEE PVDDYEQEAH EPEEDEQDDQ 240
  241 DLHKMAPTSS SSSAEAQRRY ANQHSHASRM LPGRLQMRTY HDEMRGAIRP RSQELQAPTA 300
  301 AVAGVNYSAQ PTAHPNISFV RPTFSKPVDL VSTTTHAGGG GGGGVPGTAG LSEAELPTPS 360
  361 TAAVATPMAP SSSVSASSSS SYLSQRHGHN HMHGGHPQVP PSALPLRLEA NNASGGSVSN 420
  421 GGAELCDCKT DPDAMFLMSL LPDIQKLNGR DRGKIKIAFQ NILQDYLYPD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] MSA 5.118984 View MSA. No confident structure predictions are available.
    2 View Details [210..470] FFAS03 1.26 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle