YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Alh-PA

General Information:
Name(s) found: Alh-PA / FBpp0081129 [FlyBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • The gene Alhambra is referred to in FlyBase by the symbol Dmel\Alh (CG1070, FBgn0261238). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2920318..2949907. It has the cytological map location 84B6-84C3. There is experimental evidence that it has the molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: instar larval development; haltere development; molting cycle, chitin-based cuticle. 72 alleles are reported. The phenotypes of these alleles are annotated with: larva; RP2 neuron; larval nervous system; wing. It has 9 annotated transcripts and 9 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1376 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: molting cycle, chitin-based cuticle [IMP]
    haltere development [IGI]
    regulation of transcription, DNA-dependent [ISS]
    instar larval development [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [IMP][ISS]
    zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCERNNNKQV TSSNKIPSSF NAKLELDSSK DDTIHSTSLN KKLVKIKKFK LDDMKEMVGG  60
   61 CCVCSDERGW PENPLVYCDG QNCTVAVHQA CYGIVTVPTG PWYCRKCESQ ERTSRVRCEL 120
  121 CPSRDGALKK TDNSGWAHVV CALYIPEVRF GNVTTMEPII LSLIPQERYS KTCYICQEIG 180
  181 KPNRANVGAC MQCNKSNCKQ QFHVTCAQSL GLLCEEAGNY LDNVKYCGYC QHHYSKLKKG 240
  241 GNVKTIPPYK PIQHDTSSDS CSSPEKEIDS TMNSATTSAT IIKITSSSGS AGGSSNVLNA 300
  301 SSSAGISAGS SSGSGVSSSA KQRKSNASSK SSSSSSSSSS SSTGGAPNPS SSSVHSGSAS 360
  361 NMTGGGSVLP GSSNIGNISN SLNNNLPGGS SSTSSAGNVP GGSGGIISAS SGGATQSTSS 420
  421 QSSTAPGTTK SSASSSSSSS NSYKEKHSKS LSKSTSSKDK DGKDSSTNSA NNNFTNSSAS 480
  481 STSSNSSSTR EKSSSKLSKN KDSNQVPSAT SSLSTTSSIN TQPSSSTSTA TAGSGGTGTH 540
  541 VSSSAASGLN SAPSTTNEHS NHAHTLSTNG TGAGSAAGKL QSVSNLSNSS SGFGSDLRSV 600
  601 STSSSSTVND STGGFGSNSN SERENLSGAG SSASNMPGTI APGTGGVSSS AATNLSTNKG 660
  661 GSSSSTANSL TSTSTSSGSS SNSSSKKRKA DSAKSTSSIS TSGSALEDNN SLISRYDIKD 720
  721 VQVALTPLTD FEKEIEKSSK RQRTELSPPT HQTSATAEVN APLASSTSAS IAVTASATAA 780
  781 SAPPATGTTT LGSSISGNAG STSSGNSSGV SATGGAQSAV GSGGYPKTES SKSSGTASAG 840
  841 SGSGSSSNTS STKHGSNIKD ISSSSNQQAS TASSSSAPSL YVSVPLSTAN VPGINLPTSS 900
  901 TSSSTTSESH SASSRSSGAQ SQHQQQLSNA LVGPPMGGSA GAFHGGTTSA GSSSVIQQQS 960
  961 GKSSPALGTL VSGNSGGSII SASGFPLPSG NLTATTTESG NLKISYEKQT TRVQQLQEQE1020
 1021 APPARRSRTL DLSTASASSS SPSAVPATTS PLVVLSNQLP LNSVAASSST GGLKFTYESQ1080
 1081 TQMDVPMMPV SAIKDSPPSS PGSEIGSAMH SATTAPGSLT GASTAATAQP GNVRKRGRKA1140
 1141 KDATIAAAAA AAAAAAALSN SQQDLKDVRI LQNGASNTPG NPAGSTPTPP ATPASSNAVS1200
 1201 SASSIITHTA AHMLGNQINP NSSVAQKLSE QLHMEVQDHS IYTPDSMNSQ YAGVPFPGKQ1260
 1261 RNSTAVPSNA TPAQNPLQSM FSGGGMNGNM PIPQSLEQLL ERQWEQGSQF LMEQAQHFDI1320
 1321 ASLLNCLHQL QSENLRLEEH VTSLIARRDH LLAVNARLQI PLSTIASNTK AEAHGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 5.0 No description for 2e6rA was found.
    2 View Details [105..296] FFAS03 0.995 No description for 2dfyX was found.
    3 View Details [297..406] deduced N/A No confident structure predictions are available.
    4 View Details [407..532] MSA 3.150991 View MSA. No confident structure predictions are available.
    5 View Details [533..787] deduced N/A No confident structure predictions are available.
    6 View Details [788..900] deduced N/A No confident structure predictions are available.
    7 View Details [901..1150] deduced N/A No confident structure predictions are available.
    8 View Details [1151..1292] deduced N/A No confident structure predictions are available.
    9 View Details [1293..1376] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle