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Protein Overview: l(3)82Fd-PG

General Information:
Name(s) found: l(3)82Fd-PG / FBpp0089229 [FlyBase]
Description(s) found:
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  • gi|45553247|ref|NP_996151.1| l(3)82Fd, isoform G [Drosophila melanogaster] [NCBI NR]
  • gi|45446374|gb|AAN13276.2| l(3)82Fd, isoform G [Drosophila melanogaster] [NCBI NR]
  • gi|21428734|gb|AAM50027.1| SD08996p [Drosophila melanogaster] [NCBI NR]
  • The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1098665..1176165. It has the cytological map location 82F8-82F10. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cell wall macromolecule catabolic process. 22 alleles are reported. The phenotype of these alleles is annotated with: pigment cell. It has 19 annotated transcripts and 19 annotated polypeptides. [FlyBase]
  • (AAN13276) CG32464-PG [DrosMelano7227.FASTAC.txt]
  • CG32464-PG, isoform G [Drosophila melanogaster]gi|21428734|gb|AAM50027.1| SD08996p [Drosophila melanogaster]gi|45553247|ref|NP_996151.1| CG32464-PG [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(1099669..1099804,1099871..1100040,1100457..1100616,1100688..1100809,1118362..1118563,1118720..1118882,1118941..1119092,1119784..1119956,1120028..1120601,1121363..1121517,1121579..1121685,1121869..1122357,1123924..1124211,11 [fly-100309-contam.fasta]
  • CG32464-PG, isoform G [Drosophila melanogaster] [nr-271106-contam.fasta]
  • l(3)82Fd CG32464-PG, isoform G [Drosophila melanogaster] [nr-271106-contam.fasta]
  • SD08996p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(1099669..1099804,1099871..1100040,1100457..1100616,1100688..1100809,1118362..1118563,1118720..1118882,1118941..1119092,1119784..1119956,1120028..1120601,1121363..1121517,1121579..1121685,1121869..1122357,1123924..1124211,1125192..1125295,1129833..1129904,1131433..1131467); ID=FBpp0089229; name=l(3)82Fd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,REFSEQ:NP_996151,GB_protein:AAN13276; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(1099669..1099804,1099871..1100040,1100457..1100616,1100688..1100809,1118362..1118563,1118720..1118882,1118941..1119092,1119784..1119956,1120028..1120601,1121363..1121517,1121579..1121685,1121869..1122357,1123924..1124211,1125192..1125295,1129833..1129904,1131433..1131467); ID=FBpp0089229; name=l(3)82Fd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,GB_protein:AAN13276,REFSEQ:NP_996151; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • L(3)82Fd, isoform G OS=Drosophila melanogaster GN=l(3)82Fd PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(1099669..1099804,1099871..1100040,1100457..1100616,1100688..1100809,1118362..1118563,1118720..1118882,1118941..1119092,1119784..1119956,1120028..1120601,1121363..1121517,1121579..1121685,1121869..1122357,1123924..1124211,1125192..1125295,1129833..1129904,1131433..1131467); ID=FBpp0089229; name=mtd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,GB_protein:AAN13276,REFSEQ:NP_996151,FlyMine:FBpp0089229,modMine:FBpp0089229; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(5305711..5305745,5304111..5304182,5299470..5299573,5298202..5298489,5296147..5296635,5295857..5295963,5295641..5295795,5294306..5294879,5294062..5294234,5293219..5293370,5292998..5293160,5292640..5292841,5274966..5275087,5274735..5274894,5274149..5274318,5273947..5274082)); ID=FBpp0089229; name=mtd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,GB_protein:AAN13276,REFSEQ:NP_996151,FlyMine:FBpp0089229,modMine:FBpp0089229; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(5305711..5305745,5304111..5304182,5299470..5299573,5298202..5298489,5296147..5296635,5295857..5295963,5295641..5295795,5294306..5294879,5294062..5294234,5293219..5293370,5292998..5293160,5292640..5292841,5274966..5275087,5274735..5274894,5274149..5274318,5273947..5274082)); ID=FBpp0089229; name=mtd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,GB_protein:AAN13276,REFSEQ:NP_996151,FlyMine:FBpp0089229,modMine:FBpp0089229; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4K620, Mustard, isoform G OS=Drosophila melanogaster GN=mtd PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0089229 type=protein; loc=3R:complement(join(5305711..5305745,5304111..5304182,5299470..5299573,5298202..5298489,5296147..5296635,5295857..5295963,5295641..5295795,5294306..5294879,5294062..5294234,5293219..5293370,5292998..5293160,5292640..5292841,5274966..5275087,5274735..5274894,5274149..5274318,5273947..5274082)); ID=FBpp0089229; name=mtd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,GB_protein:AAN13276,REFSEQ:NP_996151,FlyMine:FBpp0089229,modMine:FBpp0089229; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(5305711..5305745,5304111..5304182,5299470..5299573,5298202..5298489,5296147..5296635,5295857..5295963,5295641..5295795,5294306..5294879,5294062..5294234,5293219..5293370,5292998..5293160,5292640..5292841,5274966..5275087,5274735..5274894,5274149..5274318,5273947..5274082)); ID=FBpp0089229; name=mtd-PG; parent=FBgn0013576,FBtr0078818; dbxref=FlyBase_Annotation_IDs:CG32464-PG,FlyBase:FBpp0089229,GB_protein:AAN13276,REFSEQ:NP_996151,UniProt/TrEMBL:Q8MSQ5,FlyMine:FBpp0089229,modMine:FBpp0089229; MD5=7710e544a954996d1f5aae6c2d92d4c4; length=1033; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1033 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNVILTSQY YWSRRASQDV SSLSRSVDNL AIPVRRSKSR SVDHGLAAPF DLDSLRSKVE  60
   61 QRFESVDKLS RQKSSLPTIP TISYTVGNRD TLTSVAARFD TTPSELTHLN RLNSSFIYPG 120
  121 QQLLVPDKSA KDDASSSSTH DADGASLSGK SSPVERKLSG DESREKDILE GLRPGSPKPG 180
  181 HIERVGGSSQ QQQAEEEANK SDDPVITQRF LKINVRHITD GQGVVGGVLL VTPNAVMFDP 240
  241 NVSDPLVIEH GPESYGVIAP MELVVNAAIF HDIAHMRVAG GAGQGLNSAS GDAEKPEIYY 300
  301 PKPVLVEEDS KELPEQQSLL GEDGNKRLDA EIGSLEIADD QESLCSSTGR DGDAFPKAFD 360
  361 RERVEDSSME AKDSAKTDAL DDEDKKAGLG LSSTRSTLEE RRKSLLDHHW AIPSKDRYCL 420
  421 SNSRRSSEDE GDNESNVTVD SGARVQDPHS ANSSVSGVPL SQPPVAAAAA AAAVAPASAV 480
  481 VPLPPSGIDL EHLEQLSKQS CYDSGIDIRE PVPNVQPIPK KTVYSDADIV LSSDWVPPKT 540
  541 IVPTHFSESP PRSTILGQSL DAGTGGAGGV RKKTSSVSFS VDDEAAQQAQ AQSAALAVTD 600
  601 KQADKKNKML KRLSYPLTWV EGLTGEGGAV PPGGVGSGSL NKSGDTDSAP NTGDSNQSVF 660
  661 SKVFSRRSSI GTFIRPHSSE GTSSSTKLKE AKQAPKLDYR SMVSMDDKPE LFISVDKLIP 720
  721 RPARACLDPP LYLRLRMGKP IGKAIPLPTS VMSYGKNKLR AEYWFSVPKN RVDELYRFIN 780
  781 TWVKHLYGEL DEEQIKARGF ELIQEDTEWT KSGTTKAGMG GGSQDGEEIS DLTRESWEVL 840
  841 SMSTDEYRKT SLFATGSFDL DFPIPDLIGK TEILTEEHRE KLCSHLPARA EGYSWSLIFS 900
  901 TSQHGFALNS LYRKMARLES PVLIVIEDTE HNVFGALTSC SLHVSDHFYG TGESLLYKFN 960
  961 PSFKVFHWTG ENMYFIKGNM ESLSIGAGDG RFGLWLDGDL NQGRSQQCST YGNEPLAPQE1020
 1021 DFVIKTLECW AFV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] FFAS03 3.5 No description for 2djpA was found.
    2 View Details [166..418] deduced N/A No confident structure predictions are available.
    3 View Details [419..625] MSA 1.25799 View MSA. No confident structure predictions are available.
    4 View Details [626..852] deduced N/A No confident structure predictions are available.
    5 View Details [853..1033] MSA 10.131983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle