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Protein Overview: ORFP:3552

General Information:
Name(s) found: ORFP:3552 [SGD_S-Paradoxus_na_05-15-2003_con_reversed.fasta]
Description(s) found:
  • YDL055C, Contig c98 30732-31817 reverse complement [SGD_S-Paradoxus_na_05-15-2003_con_reversed.fasta]
    • Organism: Saccharomyces paradoxus
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLILVGGY GTRLRPLTLT VPKPLVEFGN RPMILHQIEA LANAGVTDIV LAVNYRPEVM  60
   61 VETLKKYEKE YGVNITFSVE TEPLGTAGPL KLAEDVLKKD NSPFFVLNSD VICEYPFKEL 120
  121 ADFHKAHGGK GTIVATKVDE PSKYGVIVHD IATPNLIDRF VEKPKEFVGN RINAGLYILN 180
  181 PEVIDLIEMK PTSIEKETFP ILVEEKQLYS FDLEGFWMDV GQPKDFLSGT VLYLNSLAKR 240
  241 QPKKLATGAN IVGNALIDPT AKISSTAKIG PDVVIGPNVT IGDGVRITRS VVLCNSTIKN 300
  301 HSLVKSTIVG WNSTVGQWCR LEGVTVLGDD VEVKDEIYIN GGKVLPHKSI SDNVPKEAII 360
  361 M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 238.66807 RmlA (RfbA)
    2 View Details [277..361] PSI-BLAST 3.0 gamma-carbonic anhydrase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • mannosyltransferase activity
    		•  3.87594044828967 bayes_pls_golite062009
  • alpha-1,2-mannosyltransferase activity
    		•  3.78995004368368 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  3.74072767898515 bayes_pls_golite062009
  • transferase activity
    		•  3.32517438937547 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  3.09763291641741 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.70047942699289 bayes_pls_golite062009
  • UTP:glucose-1-phosphate uridylyltransferase activity
    		•  2.65167602524122 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  2.62845487806844 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.51696952719873 bayes_pls_golite062009
  • UTP-monosaccharide-1-phosphate uridylyltransferase activity
    		•  2.46432078102948 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.33861720107822 bayes_pls_golite062009
  • mannose-1-phosphate guanylyltransferase activity
    		•  2.30953822963071 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.50551885980582 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  1.33788133706753 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  1.10309252319727 bayes_pls_golite062009
  • binding
    		•  1.09657219604879 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.983416157001861 bayes_pls_golite062009
  • glycogenin glucosyltransferase activity
    		•  0.968757748180341 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.513376694534047 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle