YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Nopp140-PA

General Information:
Name(s) found: Nopp140-PA / FBpp0089003 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|60678097|gb|AAX33555.1| LD06749p [Drosophila melanogaster] [NCBI NR]
  • gi|45551819|ref|NP_730694.2| Nopp140, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|45446076|gb|AAF51788.3| Nopp140, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene Nopp140 is referred to in FlyBase by the symbol Dmel\Nopp140 (CG7421, FBgn0037137). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:21825845..21829787. It has the cytological map location 78F4. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: nucleologenesis. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • (AAF51788) CG7421-PA [DrosMelano7227.FASTAC.txt]
  • CG7421-PA, isoform A [Drosophila melanogaster]gi|45551819|ref|NP_730694.2| CG7421-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(21825979..21826077,21826280..21827929,21828567..21828980); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_pro [fly-100309-contam.fasta]
  • Nopp140 CG7421-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG7421-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD06749p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(21825979..21826077,21826280..21827929,21828567..21828980); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(21825979..21826077,21826280..21827929,21828567..21828980); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • LD06749p OS=Drosophila melanogaster GN=Nopp140 PE=2 SV=3 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(21825979..21826077,21826280..21827929,21828567..21828980); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788,FlyMine:FBpp0089003,modMine:FBpp0089003; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(21832879..21832977,21833180..21834829,21835467..21835880); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788,FlyMine:FBpp0089003,modMine:FBpp0089003; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(21832879..21832977,21833180..21834829,21835467..21835880); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788,FlyMine:FBpp0089003,modMine:FBpp0089003; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of M9PFZ1, LD06749p OS=Drosophila melanogaster GN=Nopp140 PE=1 SV=3 [DROME.fasta.20160308]
  • FBpp0089003 type=protein; loc=3L:join(21832879..21832977,21833180..21834829,21835467..21835880); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788,FlyMine:FBpp0089003,modMine:FBpp0089003; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(21832879..21832977,21833180..21834829,21835467..21835880); ID=FBpp0089003; name=Nopp140-PA; parent=FBgn0037137,FBtr0089580; dbxref=FlyBase_Annotation_IDs:CG7421-PA,FlyBase:FBpp0089003,GB_protein:AAF51788.3,REFSEQ:NP_730694,GB_protein:AAF51788,UniProt/TrEMBL:Q9VNX6,FlyMine:FBpp0089003,modMine:FBpp0089003; MD5=d84f8bad3636fbc42bf4e44d7c8a1169; length=720; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 720 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [ISS][TAS]
    Biological Process: nucleologenesis [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLLKIADA IVLEYLQSKD KNLAKVFQQK TKAASVAKSS PKLSEILQFY QTKSPKKIPA  60
   61 IKATAGDSSE DSDSDSESDA APKKPATAPA LTNGKAVKKA ASSTSEDSDS EEEKKPAAKA 120
  121 TPAKAVGKKA KSSSEDSSSE EEAPKKAAPV KAPPAKAAPA KKVESSSEDS SSEEEPAKPA 180
  181 VKATTTKVAP AKKADSSSEE SSSDEETKPA AKPVAKAAPA KKAASSSEES DSDDEPAAKK 240
  241 PAVQPAAKPA PKAAASSSED SSSEEEVKPA AKSAAKLAPA KKGASSSDDS SSEDEAPKKA 300
  301 ATLAKPISKA APTKKADSST EDSSSEDDAP KKVAPAKATP AKAIPAKKAA SSDDSSSEEE 360
  361 APKKAAPANA TPARAPPAKK AASSDDSSSE EEAPKKAAPA KATPAKATPA KKAASSDDSS 420
  421 SEEEAPKKAA APAKATPAKK AKSSSEDSDS DEEEAPKKPA AKAVAKAASS EDSDSSEDEK 480
  481 PAKAAPKALA KSAKAASSDS DDSSDEETPA VKPAVKKTAA PAKKADSSSD ESDSGEESGE 540
  541 VKPNSATNGN EKTAQKRKFS GGDQDEATPN KKYNNFVKSG EQQENDFKKH NNGRGGRGGS 600
  601 GFSGRPDRST WETNKFNGEG GGDGGGFKKI GDRKSFGGFD NNQRGGRGGG GRGGGGGFGG 660
  661 RGGGGRGGGG GFGGRGGGGR GGGGFGGRGG RGGGGRGGGF GNKSFDSSAP KQNKKITFDN 720
  721

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle