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Protein Overview: RNASEH2C

General Information:
Name(s) found: RNASEH2C [HGNC (HUGO)]
Description(s) found:
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  • gi|74730607|sp|Q8TDP1.1|RNH2C_HUMAN RecName: Full=Ribonuclease H2 subunit C; Short=RNase H2 subunit C; AltName: Full=Ribonuclease HI subunit C; AltName: Full=Aicardi-Goutieres syndrome 3 protein; Short=AGS3; AltName: Full=RNase H1 small subunit [NCBI NR]
  • gi|38176285|ref|NP_115569.2| ribonuclease H2, subunit C [Homo sapiens] [NCBI NR]
  • gi|28628365|gb|AAO49177.1|AF346606_1 AYP1 [Homo sapiens] [NCBI NR]
  • gi|28628363|gb|AAO49176.1|AF346605_1 AYP1 [Homo sapiens] [NCBI NR]
  • gi|23270834|gb|AAH23588.1| Ribonuclease H2, subunit C [Homo sapiens] [NCBI NR]
  • gi|19421812|gb|AAL87739.1|AF312034_1 RNase H1 small subunit [Homo sapiens] [NCBI NR]
  • gi|119594841|gb|EAW74435.1| AYP1 protein, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119594840|gb|EAW74434.1| AYP1 protein, isoform CRA_b [Homo sapiens] [NCBI NR]
  • ribonuclease H2, subunit C [HGNC (HUGO)]
  • Ribonuclease H2 subunit C OS=Homo sapiens GN=RNASEH2C PE=1 SV=1 [Swiss-Prot]
  • AYP1 protein; RNase H1 small subunit [HMR_022704.fasta]
  • AYP1 protein [Homo sapiens]gi|23270834|gb|AAH23588.1| AYP1 protein [Homo sapiens]gi|28628365|gb|AAO49177.1| AYP1 [Homo sapiens]gi|28628363|gb|AAO49176.1| AYP1 [Homo sapiens]gi|19421812|gb|AAL87739.1| RNase H1 small subunit [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 AYP1 protein [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • ribonuclease H2, subunit C [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 RNase H1 small subunit [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • AYP1 protein; RNase H1 small subunit [Homo sapiens] [HumanGallus06162005.fasta]
  • AYP1 protein [Homo sapiens] [human-contam-plus-rand.fasta]
  • Ribonuclease H2 subunit C (RNase H2 subunit C) (Ribonuclease HI subunit C) (Aicardi-Goutieres syndrome 3 protein) (AGS3) (RNase H1 small subunit) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • AYP1 protein, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Ribonuclease H2, subunit C [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • AYP1 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • RNase H1 small subunit [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 1 of Ribonuclease H2 subunit C [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 RNASE H1 SMALL SUBUNIT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=RNASEH2C Isoform 1 of Ribonuclease H2 subunit C [human-ipi-250309-contam.fasta]
  • IPI:IPI00382985.2|SWISS-PROT:Q8TDP1-1|ENSEMBL:ENSP00000308193|REFSEQ:NP_115569|H-INV:HIT000281349 Tax_Id=9606 Gene_Symbol=RNASEH2C Isoform 1 of Ribonuclease H2 subunit C [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=RNASEH2C Isoform 1 of Ribonuclease H2 subunit C ENSG00000172922 IPI00382985 IPI00784761 [drosphohumanreversed.fasta]
  • ribonuclease H2 subunit C [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Q8TDP1;Q9H7F5; RecName: Full=Ribonuclease H2 subunit C; AltName: Full=Ribonuclease HI subunit C; AltName: Full=Aicardi-Goutieres syndrome 3 protein; AltName: Full=RNase H1 small subunit; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 1 of Ribonuclease H2 subunit C OS=Homo sapiens GN=RNASEH2C [011711_HMR.fasta]
  • GeneSymbol=RNASEH2C Synonyms=AGS3|AYP1|FLJ20974|MGC22934 ribonuclease H2 subunit C [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00382985.2|SWISS-PROT:Q8TDP1-1|ENSEMBL:ENSP00000308193|REFSEQ:NP_115569|H-INV:HIT000281349|VEGA:OTTHUMP00000233670 Tax_Id=9606 Gene_Symbol=RNASEH2C Isoform 1 of Ribonuclease H2 subunit C [ipi.HUMAN.20110912.fasta]
  • Ribonuclease H2 subunit C GN=RNASEH2C [Doctor+uniprot-HUMAN-120911.fasta]
  • AYP1 protein, isoform CRA_b OS=Homo sapiens GN=AYP1 PE=4 SV=1 [uniprot-human-031015-contam.fasta]
    • Organism: Homo sapiens
    Length: 164 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGDEAAIE RHRVHLRSAT LRDAVPATLH LLPCEVAVDG PAPVGRFFTP AIRQGPEGLE  60
   61 VSFRGRCLRG EEVAVPPGLV GYVMVTEEKK VSMGKPDPLR DSGTDDQEEE PLERDFDRFI 120
  121 GATANFSRFT LWGLETIPGP DAKVRGALTW PSLAAAIHAQ VPED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] Pfam 54.455932 No description for PF08615.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle