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Protein Overview: gi|25777621

General Information:
Name(s) found: gi|25777621 [NCBI NR]
Description(s) found:
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  • gi|25777621|ref|NP_736608.1| chromodomain protein, Y chromosome-like isoform c [Homo sapiens] [NCBI NR]
  • chromodomain protein, Y chromosome-like isoform c; CDY-like, autosomal; testis-specific chromodomain Y-like protein [HMR_022704.fasta]
  • chromodomain protein, Y chromosome-like isoform c; CDY-like, autosomal; testis-specific chromodomain Y-like protein; chromodomain protein, Y chromosome-like [071204_hmrz_cont.fasta]
  • chromodomain protein, Y chromosome-like isoform c [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 chromodomain protein, Y chromosome-like isoform c [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • Tax_Id=9606 Chromodomain protein, Y Chromosome-like isoform C [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • Tax_Id=9606 Chromodomain protein, Y Chromosome-like isoform C [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • chromodomain protein, Y chromosome-like isoform c; CDY-like, autosomal; testis-specific chromodomain Y-like protein; chromodomain protein, Y chromosome-like [Homo sapiens] [HumanGallus06162005.fasta]
  • chromodomain protein, Y chromosome-like isoform c; CDY-like, autosomal; testis-specific chromodomain Y-like protein [Homo sapiens] [human-NCBI-042104-rand.fasta]
  • IPI:IPI00942198.1|SWISS-PROT:Q9Y232-3|ENSEMBL:ENSP00000380716 Tax_Id=9606 Gene_Symbol=CDYL Isoform 3 of Chromodomain Y-like protein [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=CDYL Isoform 3 of Chromodomain Y-like protein [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Isoform 3 of Chromodomain Y-like protein OS=Homo sapiens GN=CDYL [011711_HMR.fasta]
  • IPI:IPI00942198.1|SWISS-PROT:Q9Y232-3 Tax_Id=9606 Gene_Symbol=CDYL Isoform 3 of Chromodomain Y-like protein [ipi.HUMAN.20110912.fasta]
  • Isoform 3 of Chromodomain Y-like protein GN=CDYL [Doctor+uniprot-HUMAN-120911.fasta]
  • Isoform of Q9Y232, Isoform 3 of Chromodomain Y-like protein OS=Homo sapiens GN=CDYL [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALTANGTT NIQTSVTGVT ASKRKFIDDR RDQPFDKRLR FSVRQTESAY RYRDIVVRKQ  60
   61 DGFTHILLST KSSENNSLNP EVMREVQSAL STAAADDSKL VLLSAVGSVF CCGLDFIYFI 120
  121 RRLTDDRKRE STKMAEAIRN FVNTFIQFKK PIIVAVNGPA IGLGASILPL CDVVWANEKA 180
  181 WFQTPYTTFG QSPDGCSTVM FPKIMGGASA NEMLLSGRKL TAQEACGKGL VSQVFWPGTF 240
  241 TQEVMVRIKE LASCNPVVLE ESKALVRCNM KMELEQANER ECEVLKKIWG SAQGMDSMLK 300
  301 YLQRKIDEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 48.221849 No description for 2gtrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.51

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle