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Protein Overview: gi|19913394

General Information:
Name(s) found: gi|19913394 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|19913394|ref|NP_008863.3| smoothelin isoform c [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 917 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEALAGLD EGALRKLLEV TADLAERRRI RSAIRELQRQ ELEREEEALA SKRFRAERQD  60
   61 NKENWLHSQQ REAEQRAALA RLAGQLESMN DVEELTALLR SAGEYEERKL IRAAIRRVRA 120
  121 QEIEAATLAG RLYSGRPNSG SREDSKGLAA HRLEQCEVPE REEQEQQAEV SKPTPTPEGT 180
  181 SQDVTTVTLL LRAPPGSTSS SPASPSSSPT PASPEPPLEP AEAQCLTAEV PGSPEPPPSP 240
  241 PKTTSPEPQE SPTLPSTEGQ VVNKLLSGPK ETPAAQSPTR GPSDTKRADV AGPRPCQRSL 300
  301 SVLSPRQPAQ NRESTPLASG PSSFQRAGSV RDRVHKFTSD SPMAARLQDG TPQAALSPLT 360
  361 PARLLGPSLT STTPASSSSG SSSRGPSDTS SRFSKEQRGV AQPLAQLRSC PQEEGPRGRG 420
  421 LAARPLENRA GGPVARSEEP GAPLPVAVGT AEPGGSMKTT FTIEIKDGRG QASTGRVLLP 480
  481 TGNQRAELTL GLRAPPTLLS TSSGGKSTIT RVNSPGTLAR LGSVTHVTSF SHAPPSSRGG 540
  541 CSIKMEAEPA EPLAAAVEAA NGAEQTRVNK APEGRSPLSA EELMTIEDEG VLDKMLDQST 600
  601 DFEERKLIRA ALRELRQRKR DQRDKERERR LQEARGRPGE GRGNTATETT TRHSQRAADG 660
  661 SAVSTVTKTE RLVHSNDGTR TARTTTVESS FVRRSENGSG STMMQTKTFS SSSSSKKMGS 720
  721 IFDREDQASP RAGSLAALEK RQAEKKKELM KAQSLPKTSA SQARKAMIEK LEKEGAAGSP 780
  781 GGPRAAVQRS TSFGVPNANS IKQMLLDWCR AKTRGYEHVD IQNFSSSWSD GMAFCALVHN 840
  841 FFPEAFDYGQ LSPQNRRQNF EVAFSSAEML VDCVPLVEVD DMMIMGKKPD PKCVFTYVQS 900
  901 LYNHLRRHEL RLRGKNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] deduced N/A No confident structure predictions are available.
    2 View Details [145..431] MSA 4.192997 View MSA. No confident structure predictions are available.
    3 View Details [432..663] deduced N/A No confident structure predictions are available.
    4 View Details [664..789] deduced N/A No confident structure predictions are available.
    5 View Details [790..917] PSI-BLAST 39.045757 No description for 2d87A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle