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Protein Overview: gi|189020, gi|48...

General Information:
Name(s) found: gi|48145795 [NCBI NR]
gi|189020 [NCBI NR]
gi|17986260 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|48145795|emb|CAG33120.1| MYL6 [Homo sapiens] [NCBI NR]
  • gi|189020|gb|AAA36347.1| non-muscle myosin light chain [NCBI NR]
  • gi|17986260|ref|NP_524147.1| smooth muscle and non-muscle myosin alkali light chain isoform 2 [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 116 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALGQNPTN AEVLKVLGNP KSDEMNVKVL DFEHFLPMLQ TVAKNKDQGT YEDYVEGLRV  60
   61 FDKEGNGTVM GAEIRHVLVT LGEKMTEEEV EMLVAGHEDS NGCINYEELV RMVLNG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 23.522879 Crystal structure of Myosin V nucleotide-free

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of muscle
    		•  1.82798691843677 bayes_pls_golite062009
  • binding
    		•  1.39263455617025 bayes_pls_golite062009
  • calcium ion binding
    		•  0.326789035157241 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.23428187212879 bayes_pls_golite062009
  • ion binding
    		•  0.228888934051136 bayes_pls_golite062009
  • cation binding
    		•  0.227323129980928 bayes_pls_golite062009
  • metal ion binding
    		•  0.227323129980928 bayes_pls_golite062009
  • actin-dependent ATPase activity
    		•  0.202848143062719 bayes_pls_golite062009
  • actin binding
    		•  0.141490694597336 bayes_pls_golite062009
  • protein binding
    		•  0.0504192768094249 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle