Protein Overview: CG1399-PB

General Information:
Name(s) found:	CG1399-PB / FBpp0088013 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|161076373\|ref\|NP_610316.3\| CG1399, isoform B [Drosophila melanogaster] [NCBI NR] gi\|157400217\|gb\|AAF59205.3\| CG1399, isoform B [Drosophila melanogaster] [NCBI NR] This gene is referred to in FlyBase by the symbol Dmel\CG1399 (CG1399, FBgn0033212). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3564045..3586395. It has the cytological map location 43E9-43E11. Based on sequence similarity, it is predicted to have molecular function</span>: myosin I binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: cilium assembly. 9 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase] type=protein; loc=2R:complement(3565497..3565909,3566075..3566131,3566198..3566311,3566373..3566777,3566847..3567435,3568430..3568504,3568813..3568975,3570031..3571018,3571078..3571411,3571473..3571550,3571618..3571805,3572479..3572576,3572638..3572799,35 [fly-100309-contam.fasta] type=protein; loc=2R:complement(3565497..3565909,3566075..3566131,3566198..3566311,3566373..3566777,3566847..3567435,3568430..3568504,3568813..3568975,3570031..3571018,3571078..3571411,3571473..3571550,3571618..3571805,3572479..3572576,3572638..3572799,3572868..3573094,3574049..3574132,3574213..3574341,3574409..3574459,3575701..3575798,3582594..3582699); ID=FBpp0088013; name=CG1399-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=2R:complement(3565497..3565909,3566075..3566131,3566198..3566311,3566373..3566777,3566847..3567435,3568430..3568504,3568813..3568975,3570031..3571018,3571078..3571411,3571473..3571550,3571618..3571805,3572479..3572576,3572638..3572799,3572868..3573094,3574049..3574132,3574213..3574341,3574409..3574459,3575701..3575798,3582594..3582699); ID=FBpp0088013; name=CG1399-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] CG1399, isoform B OS=Drosophila melanogaster GN=CG1399 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=2R:complement(3565497..3565909,3566075..3566131,3566198..3566311,3566373..3566777,3566847..3567435,3568430..3568504,3568813..3568975,3570031..3571018,3571078..3571411,3571473..3571550,3571618..3571805,3572479..3572576,3572638..3572799,3572868..3573094,3574049..3574132,3574213..3574341,3574409..3574459,3575701..3575798,3582594..3582699); ID=FBpp0088013; name=CG1399-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205,FlyMine:FBpp0088013,modMine:FBpp0088013; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] CG1399, isoform B OS=Drosophila melanogaster GN=CG1399 PE=4 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta] type=protein; loc=2R:complement(join(7695089..7695194,7688196..7688293,7686904..7686954,7686708..7686836,7686544..7686627,7685363..7685589,7685133..7685294,7684974..7685071,7684113..7684300,7683968..7684045,7683573..7683906,7682526..7683513,7681308..7681470,7680925..7680999,7679342..7679930,7678868..7679272,7678693..7678806,7678570..7678626,7677992..7678404)); ID=FBpp0088013; name=CG1399-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205,FlyMine:FBpp0088013,modMine:FBpp0088013; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=2R:complement(join(7695089..7695194,7688196..7688293,7686904..7686954,7686708..7686836,7686544..7686627,7685363..7685589,7685133..7685294,7684974..7685071,7684113..7684300,7683968..7684045,7683573..7683906,7682526..7683513,7681308..7681470,7680925..7680999,7679342..7679930,7678868..7679272,7678693..7678806,7678570..7678626,7677992..7678404)); ID=FBpp0088013; name=LRR-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205,FlyMine:FBpp0088013,modMine:FBpp0088013; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of A0A0B4KEE7, CG1399, isoform B OS=Drosophila melanogaster GN=LRR PE=1 SV=2 [DROME.fasta.20160308] FBpp0088013 type=protein; loc=2R:complement(join(7695089..7695194,7688196..7688293,7686904..7686954,7686708..7686836,7686544..7686627,7685363..7685589,7685133..7685294,7684974..7685071,7684113..7684300,7683968..7684045,7683573..7683906,7682526..7683513,7681308..7681470,7680925..7680999,7679342..7679930,7678868..7679272,7678693..7678806,7678570..7678626,7677992..7678404)); ID=FBpp0088013; name=LRR-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205,FlyMine:FBpp0088013,modMine:FBpp0088013; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=2R:complement(join(7695089..7695194,7688196..7688293,7686904..7686954,7686708..7686836,7686544..7686627,7685363..7685589,7685133..7685294,7684974..7685071,7684113..7684300,7683968..7684045,7683573..7683906,7682526..7683513,7681308..7681470,7680925..7680999,7679342..7679930,7678868..7679272,7678693..7678806,7678570..7678626,7677992..7678404)); ID=FBpp0088013; name=LRR-PB; parent=FBgn0033212,FBtr0088939; dbxref=FlyBase:FBpp0088013,FlyBase_Annotation_IDs:CG1399-PB,GB_protein:AAF59205,GB_protein:AAF59205.2,REFSEQ:NP_610316,GB_protein:AAF59205,UniProt/TrEMBL:A1Z734,FlyMine:FBpp0088013,modMine:FBpp0088013; MD5=f36bdf230ab8fec7efc5f9aca401cf47; length=1452; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	1452 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	cilium assembly [UNKNOWN]
Molecular Function:	myosin I binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEMRTMEMM THIDQYLRRI IELQIRDVVK QNRDKESVKS ILGRHTKILV KYMVKLETKG  60
   61 DKTENRVLVF TPVRVYLLSA KVPTKIECHF HYLDIVGVES KKSTHFSIVT NDRPYSFVTT 120
  121 GDAGNFSSNA DVILTDLASA IKQIFPTVPL KYIIRKIDIQ PPERETIFSE EFRPSDPRNV 180
  181 GPCGGFSAQY ACMCDFHGVP YREEVAWDVD TIYLSHDTRV LNLRDFDHLE PKDLMAIVSA 240
  241 LEYNTFFRGL KAAHMRLSHE TLERILHVLK RSMWLEELHL EALGLRWDFL NKLSISVITN 300
  301 SNPAIRTIDL SHNIIEDKGA IHLAGPIAKV SKGLCKLALA HCGLTSKGVN QMSHSLTLNQ 360
  361 SISNSLTYLD LSGNSLKDDI TNLHNFLAQP NVLEHLDLAS TDITLENLFG ALLRGCATHL 420
  421 AHLNVSHNSF STKKGKEIPP SFKQFFTSTF SLKHLNIAGC KLPMEALKNL LLGLACNEST 480
  481 AGLYLDLSSN TLGAQGAHVL ESCIHGVRVL QSLDISDNNL DAELAPVLTA ISKNPSIRTL 540
  541 HLTRSLTGMK PKHIPPVMDA LVNLIQKDDF PLVELVLSEN KLKHDLHDFI NALGSNQSLQ 600
  601 KLDISGNFMG DVGARLLAKA LQINNRLRTI YMDKNGVTLQ GYADIVYALE HNHSMRTIPF 660
  661 PVFDIAPHLK SHPDKTDAVM RKMQELLQRN CNGLKRATGQ GFRLQHGFML SSTHQLVDKL 720
  721 VAETQDTISL AKGGSESASA VQRLITDAEN CKQLMPKLQE AVRNESHPIE MKMTRVASEL 780
  781 SYTIKSYLEE TMETMMRTGI EQCPKTLGNQ IVVQDLRKAL AERLVVPEEF LQICLLNNAG 840
  841 SEIMNKVGEI EQSLAAAISD RATDEVLEAL TRYRRGMGIA ESPSVLLDEP QTPDIVRSRS 900
  901 SHDADGLIIR PGGRGSILPK LGLESPTATP HLPTKRRSLA KKVRPQSVVE NLSLGHFPDL 960
  961 LESPSSHRSN SQLSARAAAG AAALVGAANM TDSIAVDDGG VDECCDSITE LPSASFQLQH1020
 1021 LVKGRPKRAK TRAPTRPLVT TECAGGSREI GEGLEHFFRP GSVTPTTLTP LVSPTSEECS1080
 1081 SLSFVDSPTM SRDGNGHMTS EETTPILEER RPIKLERQSP LLKSASWATR SRSTDNLEKY1140
 1141 SPLVGRKSPL VKMRTEGGPG SGSATGAEET SMPSSNLLKA TAREDKTRSP SSDSIKSHAA1200
 1201 GEGSVIVKTG NGILRTPIVL QKPRPWSVVG SEPKAGGDLI TGNGNADSSK TTPDKLEEDD1260
 1261 VEIVTFGNTC SGSIVGITPG IALSTSGGGS IVGITPGGAL EKKSVRELAA GLNRMELPLK1320
 1321 PPVMPRTLLN ATSVRTSTSS TGSTSNSVSV SSSTNANTSM TVLNQSQTRS RIVSSTSSTD1380
 1381 STETITERST TSTSSSSSSS YEKQHAKACA NLISNEILSM RNGQLGAKSG SCAESGGVKR1440
 1441 IAGKEISTLF EV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.92

Protein Overview: CG1399-PB

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: