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Protein Overview: YJDK_ECOLI

General Information:
Name(s) found: YJDK_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|84028052|sp|P0AF61.1|YJDK_ECOLI RecName: Full=Uncharacterized protein yjdK [NCBI NR]
  • gi|536973|gb|AAA97028.1| ORF_o98 [Escherichia coli] [NCBI NR]
  • pir||C86108 hypothetical protein yjdK [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||F91267 hypothetical protein ECs5110 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209750636|gb|ACI73625.1| hypothetical protein ECs5110 [Escherichia coli] [NCBI NR]
  • gi|209750634|gb|ACI73624.1| hypothetical protein ECs5110 [Escherichia coli] [NCBI NR]
  • gi|209750632|gb|ACI73623.1| hypothetical protein ECs5110 [Escherichia coli] [NCBI NR]
  • gi|209750630|gb|ACI73622.1| hypothetical protein ECs5110 [Escherichia coli] [NCBI NR]
  • gi|209750628|gb|ACI73621.1| hypothetical protein ECs5110 [Escherichia coli] [NCBI NR]
  • pir||S56357 hypothetical 11.5K protein (dcub-lysu intergenic region) - Escherichia coli (strain K-12) [NCBI NR]
  • Hypothetical protein yjdK - Escherichia coli [Swiss-Prot]
  • hypothetical protein; unknown CDS [Escherichia coli K12]gi|15834364|ref|NP_313137.1| hypothetical protein ECs5110 [Escherichia coli O157:H7]gi|15804720|ref|NP_290761.1| hypothetical protein Z5730 [Escherichia coli O157:H7 EDL933]gi|1790570|gb|AAC77089. [nrdb_11152004_Chlamydomonas]
  • Uncharacterized protein yjdK [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • ORF_o98 [Escherichia coli] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Uncharacterized protein yjdK OS=Escherichia coli (strain K12) GN=yjdK PE=4 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Endoribonuclease GhoS OS=Escherichia coli (strain K12) GN=ghoS PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 98 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKNKFNTY VVSFDYPSSY SSVFLRLRSL MYDMNFSSIV ADEYGIPRQL NENSFAITTS  60
   61 LAASEIEDLI RLKCLDLPDI DFDLNIMTVD DYFRQFYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle