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Protein Overview: YDCJ_ECOLI

General Information:
Name(s) found: YDCJ_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Hypothetical protein ydcJ - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSITADEI REQFSQAMSA MYQQEVPQYG TLLELVADVN LAVLENNPQL HEKMVNADEL  60
   61 ARLNVERHGA IRVGTAQELA TLRRMFAIMG MYPVSYYDLS QAGVPVHSTA FRPIDDASLA 120
  121 RNPFRVFTSL LRLELIENEI LRQKAAEILR QRDIFTPRCR QLLEEYEQQG GFNETQAQEF 180
  181 VQEALETFRW HQSATVDEET YRALHNEHRL IADVVCFPGC HINHLTPRTL DIDRVQSMMP 240
  241 ECGIEPKILI EGPPRREVPI LLRQTSFKAL EETVLFAGQK QGTHTARFGE IEQRGVALTP 300
  301 KGRQLYDDLL RNAGTGQDNL THQMHLQETF RTFPDSEFLM RQQGLAWFRY RLTPSGEAHR 360
  361 QAIHPGDDPQ PLIERGWVVA QPITYEDFLP VSAAGIFQSN LGNETQTRSH GNASREAFEQ 420
  421 ALGCPVLDEF QLYQEAEERS KRRCGLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] MSA 2.040953 View MSA. No confident structure predictions are available.
    2 View Details [173..278] PSI-BLAST 10.69897 Methylmalonyl-CoA epimerase
    3 View Details [279..447] MSA 1.042932 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.451352729218579 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle